Basic Information:

  VIRBase ID:  

VHID00316699

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:  MIMAT0003415          ST8SIA1:  NM_001304450     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-3p	ST8SIA1
miRBase Accession/Entrez ID	MIMAT0003415	6489
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GD3S//SIAT8//SIAT8-A//SIAT8A//ST8SiaI

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ST8SIA1	chr12:22379966(-) A-I      intronic chr12:22402301(-) A-I      intronic chr12:22438763(-) A-I      intronic chr12:22413207(-) A-I      intronic chr12:22410366(-) A-I      intronic chr12:22394066(-) A-I      intronic chr12:22348054(-) A-I      3'UTR chr12:22348070(-) A-I      3'UTR chr12:22348041(-) A-I      3'UTR chr12:22394017(-) A-I      intronic chr12:22413260(-) A-I      intronic chr12:22397519(-) A-I      intronic chr12:22379953(-) A-I      intronic chr12:22379948(-) A-I      intronic chr12:22458509(-) A-I      intronic chr12:22405507(-) A-I      intronic chr12:22411018(-) A-I      intronic chr12:22364181(-) A-I      intronic chr12:22413350(-) A-I      intronic chr12:22413893(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ST8SIA1	chr12:22354143-22354144(-) m6A 3'UTR//intron       24209618 chr12:22354158-22354159(-) m6A 3'UTR//intron       24209618 chr12:22354185-22354186(-) m6A 3'UTR//intron       24209618 chr12:22354190-22354191(-) m6A 3'UTR//intron       24209618 chr12:22354299-22354300(-) m6A 3'UTR//intron       24209618//25456834 chr12:22354315-22354316(-) m6A 3'UTR//intron       24209618//25456834 chr12:22354342-22354343(-) m6A 3'UTR//intron       24209618//25456834 chr12:22354373-22354374(-) m6A 3'UTR//intron       24209618//25456834//27371828 chr12:22354459-22354460(-) m6A 3'UTR//exon//intron       24209618//25456834//27371828 chr12:22354464-22354465(-) m6A 3'UTR//exon//intron       24209618//25456834//27371828 chr12:22354482-22354483(-) m6A 3'UTR//exon//intron       24209618//25456834//27371828 chr12:22354522-22354523(-) m6A 3'UTR//CDS//exon//intron       25456834//27371828 chr12:22487090-22487091(-) m6A CDS//intron       27371828 chr12:22487236-22487237(-) m6A 5'UTR//intron       25456834//27371828 chr12:22487274-22487275(-) m6A 5'UTR//intron       25456834//27371828 chr12:22487448-22487449(-) m6A 5'UTR//intron       27371828 chr12:22487493-22487494(-) m6A 5'UTR//intron       27371828 chr12:22487525-22487526(-) m6A 5'UTR//intron       25456834//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ST8SIA1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-3p
Interactor2: ST8SIA1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg