Basic Information:

  VIRBase ID:  

VHID00316125

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:  MIMAT0003415          DPYSL3:  NM_001197294     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-3p	DPYSL3
miRBase Accession/Entrez ID	MIMAT0003415	1809
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CRMP-4//CRMP4//DRP-3//DRP3//LCRMP//ULIP//ULIP-1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DPYSL3	chr5:146881292(-) A-I      intronic chr5:146881269(-) A-I      intronic chr5:146868723(-) A-I      intronic chr5:146836396(-) A-I      intronic chr5:146882886(-) A-I      intronic chr5:146882304(-) A-I      intronic chr5:146882288(-) A-I      intronic chr5:146844579(-) A-I      intronic chr5:146881224(-) A-I      intronic chr5:146836400(-) A-I      intronic chr5:146844544(-) A-I      intronic chr5:146836399(-) A-I      intronic chr5:146881238(-) A-I      intronic chr5:146881293(-) A-I      intronic chr5:146836282(-) A-I      intronic chr5:146882296(-) A-I      intronic chr5:146813590(-) A-I      intronic chr5:146844608(-) A-I      intronic chr5:146880065(-) A-I      intronic chr5:146880077(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DPYSL3	chr5:146868748(-) A-I intron -    19478186 chr5:146868749(-) A-I intron -    19478186 chr5:146868750(-) A-I intron -    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DPYSL3	chr5:146771219-146771220(-) m6A 3'UTR       24981863 chr5:146771352-146771353(-) m6A 3'UTR       27773535 chr5:146773242-146773243(-) m6A 3'UTR       24981863//27773535 chr5:146773271-146773272(-) m6A 3'UTR       24981863//27773535 chr5:146773348-146773349(-) m6A 3'UTR       27773535 chr5:146833127-146833128(-) m6A CDS//exon//intron       24209618//25456834//24981863//27773536 chr5:146833346-146833347(-) m6A 5'UTR//intron       25456834//24981863 chr5:146833405-146833406(-) m6A 5'UTR//intron       25456834//24981863 chr5:146833410-146833411(-) m6A 5'UTR//intron       25456834//24981863 chr5:146833748-146833749(-) m6A 5'UTR//intron       25456834 chr5:146833765-146833766(-) m6A 5'UTR//intron       25456834 chr5:146852861-146852862(-) m6A exon//intron       24209618 chr5:146852891-146852892(-) m6A exon//intron       24209618//27773536 chr5:146889044-146889045(-) m6A CDS//exon       24209618//27773536 chr5:146889059-146889060(-) m6A CDS//exon       24209618//25456834//27773536 chr5:146889170-146889171(-) m6A CDS       24209618//25456834//24981863//27773536 chr5:146889231-146889232(-) m6A CDS       24209618//25456834//27773536 chr5:146889341-146889342(-) m6A CDS       24209618//24981863//27773536 chr5:146889395-146889396(-) m6A CDS       24209618//25456834//24981863//27773536 chr5:146889423-146889424(-) m6A 5'UTR       24209618//25456834//24981863//27773536 chr5:146889448-146889449(-) m6A 5'UTR       25456834//24981863//27773536 chr5:146889573-146889574(-) m6A 5'UTR       24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DPYSL3	Cytosol HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-3p
Interactor2: DPYSL3

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg