Basic Information:

  VIRBase ID:  

VHID00315076

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-5p:  MIMAT0003414          NIFK:  NM_032390     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-5p	NIFK
miRBase Accession/Entrez ID	MIMAT0003414	84365
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MKI67IP//Nopp34

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NIFK	chr2:122487225(-) A-I      intronic chr2:122487238(-) A-I      intronic chr2:122491604(-) A-I      intronic chr2:122487188(-) A-I      intronic chr2:122486900(-) A-I      intronic chr2:122486887(-) A-I      intronic chr2:122486911(-) A-I      intronic chr2:122487292(-) A-I      intronic chr2:122487305(-) A-I      intronic chr2:122487262(-) A-I      intronic chr2:122487233(-) A-I      intronic chr2:122486861(-) A-I      intronic chr2:122491753(-) A-I      intronic chr2:122487265(-) A-I      intronic chr2:122487655(-) A-I      intronic chr2:122486868(-) A-I      intronic chr2:122487201(-) A-I      intronic chr2:122487301(-) A-I      intronic chr2:122486831(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NIFK	chr2:122485246-122485247(-) m6A 3'UTR       24981863//27773535//22608085 chr2:122485346-122485347(-) m6A CDS//exon       24981863//27773535//22608085 chr2:122485352-122485353(-) m6A CDS//exon       24981863//27773535//22608085 chr2:122485389-122485390(-) m6A CDS//exon       24981863//27773535//22608085 chr2:122485428-122485429(-) m6A CDS//exon       24981863//27773535//22608085 chr2:122485877-122485878(-) m6A CDS//exon       27773535 chr2:122486081-122486082(-) m6A CDS//exon//intron       27773535 chr2:122488572-122488573(-) m6A CDS//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NIFK	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-5p
Interactor2: NIFK

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg