Basic Information:

  VIRBase ID:  

VHID00314468

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-5p:  MIMAT0003414          BIVM:  NM_001159596     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-5p	BIVM
miRBase Accession/Entrez ID	MIMAT0003414	54841
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BIVM	chr13:103489474(+) A-I      intronic chr13:103459077(+) A-I      intronic chr13:103458700(+) A-I      intronic chr13:103484284(+) A-I      intronic chr13:103489477(+) A-I      intronic chr13:103484316(+) A-I      intronic chr13:103484315(+) A-I      intronic chr13:103484130(+) A-I      intronic chr13:103467193(+) A-I      intronic chr13:103454922(+) A-I      intronic chr13:103489468(+) A-I      intronic chr13:103487962(+) A-I      intronic chr13:103487626(+) A-I      intronic chr13:103485947(+) A-I      intronic chr13:103489476(+) A-I      intronic chr13:103485740(+) A-I      intronic chr13:103484301(+) A-I      intronic chr13:103484280(+) A-I      intronic chr13:103489573(+) A-I      intronic chr13:103473704(+) A-I      intronic chr13:103467378(+) A-I      intronic chr13:103458797(+) A-I      intronic chr13:103484274(+) A-I      intronic chr13:103484564(+) A-I      intronic chr13:103457081(+) A-I      intronic chr13:103456822(+) A-I      intronic chr13:103487545(+) A-I      intronic chr13:103455195(+) A-I      intronic chr13:103487522(+) A-I      intronic chr13:103456730(+) A-I      intronic chr13:103485498(+) A-I      intronic chr13:103457072(+) A-I      intronic chr13:103457070(+) A-I      intronic chr13:103487496(+) A-I      intronic chr13:103457044(+) A-I      intronic chr13:103457019(+) A-I      intronic chr13:103457012(+) A-I      intronic chr13:103456997(+) A-I      intronic chr13:103456983(+) A-I      intronic chr13:103455117(+) A-I      intronic chr13:103456787(+) A-I      intronic chr13:103489467(+) A-I      intronic chr13:103456631(+) A-I      intronic chr13:103459011(+) A-I      intronic chr13:103456847(+) A-I      intronic chr13:103455781(+) A-I      intronic chr13:103455628(+) A-I      intronic chr13:103487543(+) A-I      intronic chr13:103456548(+) A-I      intronic chr13:103456541(+) A-I      intronic chr13:103484111(+) A-I      intronic chr13:103455722(+) A-I      intronic chr13:103455710(+) A-I      intronic chr13:103455700(+) A-I      intronic chr13:103455677(+) A-I      intronic chr13:103455597(+) A-I      intronic chr13:103455151(+) A-I      intronic chr13:103453879(+) A-I      intronic chr13:103453865(+) A-I      intronic chr13:103457084(+) A-I      intronic chr13:103485807(+) A-I      intronic chr13:103453790(+) A-I      intronic chr13:103489543(+) A-I      intronic chr13:103487903(+) A-I      intronic chr13:103489603(+) A-I      intronic chr13:103489395(+) A-I      intronic chr13:103489475(+) A-I      intronic chr13:103487691(+) A-I      intronic chr13:103489466(+) A-I      intronic chr13:103458835(+) A-I      intronic chr13:103487534(+) A-I      intronic chr13:103459036(+) A-I      intronic chr13:103484628(+) A-I      intronic chr13:103489611(+) A-I      intronic chr13:103488118(+) A-I      intronic chr13:103485462(+) A-I      intronic chr13:103489517(+) A-I      intronic chr13:103456937(+) A-I      intronic chr13:103489382(+) A-I      intronic chr13:103455196(+) A-I      intronic chr13:103487527(+) A-I      intronic chr13:103487963(+) A-I      intronic chr13:103485488(+) A-I      intronic chr13:103453855(+) A-I      intronic chr13:103455417(+) A-I      intronic chr13:103488103(+) A-I      intronic chr13:103488066(+) A-I      intronic chr13:103456800(+) A-I      intronic chr13:103488925(+) A-I      intronic chr13:103487479(+) A-I      intronic chr13:103489489(+) A-I      intronic chr13:103453725(+) A-I      intronic chr13:103488083(+) A-I      intronic chr13:103487623(+) A-I      intronic chr13:103488024(+) A-I      intronic chr13:103487953(+) A-I      intronic chr13:103489588(+) A-I      intronic chr13:103489537(+) A-I      intronic chr13:103492923(+) A-I      3'UTR chr13:103485935(+) A-I      intronic chr13:103455732(+) A-I      intronic chr13:103487923(+) A-I      intronic chr13:103485778(+) A-I      intronic chr13:103489388(+) A-I      intronic chr13:103459075(+) A-I      intronic chr13:103456717(+) A-I      intronic chr13:103455464(+) A-I      intronic chr13:103455657(+) A-I      intronic chr13:103488802(+) A-I      intronic chr13:103487606(+) A-I      intronic chr13:103467212(+) A-I      intronic chr13:103484627(+) A-I      intronic chr13:103455213(+) A-I      intronic chr13:103455759(+) A-I      intronic chr13:103485790(+) A-I      intronic chr13:103456873(+) A-I      intronic chr13:103487646(+) A-I      intronic chr13:103458780(+) A-I      intronic chr13:103489481(+) A-I      intronic chr13:103467300(+) A-I      intronic chr13:103455765(+) A-I      intronic chr13:103455459(+) A-I      intronic chr13:103455581(+) A-I      intronic chr13:103485878(+) A-I      intronic chr13:103458693(+) A-I      intronic chr13:103487939(+) A-I      intronic chr13:103484572(+) A-I      intronic chr13:103455418(+) A-I      intronic chr13:103487473(+) A-I      intronic chr13:103458674(+) A-I      intronic chr13:103467377(+) A-I      intronic chr13:103489427(+) A-I      intronic chr13:103455598(+) A-I      intronic chr13:103485873(+) A-I      intronic chr13:103485359(+) A-I      intronic chr13:103459065(+) A-I      intronic chr13:103456802(+) A-I      intronic chr13:103487528(+) A-I      intronic chr13:103484772(+) A-I      intronic chr13:103456844(+) A-I      intronic chr13:103456982(+) A-I      intronic chr13:103467336(+) A-I      intronic chr13:103489351(+) A-I      intronic chr13:103455774(+) A-I      intronic chr13:103458739(+) A-I      intronic chr13:103488044(+) A-I      intronic chr13:103487588(+) A-I      intronic chr13:103487969(+) A-I      intronic chr13:103484719(+) A-I      intronic chr13:103487663(+) A-I      intronic chr13:103489451(+) A-I      intronic chr13:103484116(+) A-I      intronic chr13:103455625(+) A-I      intronic chr13:103489463(+) A-I      intronic chr13:103488049(+) A-I      intronic chr13:103458862(+) A-I      intronic chr13:103455643(+) A-I      intronic chr13:103489485(+) A-I      intronic chr13:103455511(+) A-I      intronic chr13:103489604(+) A-I      intronic chr13:103488012(+) A-I      intronic chr13:103467279(+) A-I      intronic chr13:103487976(+) A-I      intronic chr13:103485478(+) A-I      intronic chr13:103488157(+) A-I      intronic chr13:103454143(+) A-I      intronic chr13:103455785(+) A-I      intronic chr13:103453784(+) A-I      intronic chr13:103487902(+) A-I      intronic chr13:103472520(+) A-I      intronic chr13:103488853(+) A-I      intronic chr13:103455482(+) A-I      intronic chr13:103455595(+) A-I      intronic chr13:103456553(+) A-I      intronic chr13:103484641(+) A-I      intronic chr13:103456790(+) A-I      intronic chr13:103453787(+) A-I      intronic chr13:103488938(+) A-I      intronic chr13:103456668(+) A-I      intronic chr13:103463101(+) A-I      intronic chr13:103488706(+) A-I      intronic chr13:103455235(+) A-I      intronic chr13:103455773(+) A-I      intronic chr13:103459096(+) A-I      intronic chr13:103485544(+) A-I      intronic chr13:103489457(+) A-I      intronic chr13:103485494(+) A-I      intronic chr13:103488885(+) A-I      intronic chr13:103487587(+) A-I      intronic chr13:103488828(+) A-I      intronic chr13:103481925(+) A-I      intronic chr13:103455228(+) A-I      intronic chr13:103488104(+) A-I      intronic chr13:103457062(+) A-I      intronic chr13:103488740(+) A-I      intronic chr13:103455182(+) A-I      intronic chr13:103487474(+) A-I      intronic chr13:103455733(+) A-I      intronic chr13:103488873(+) A-I      intronic chr13:103487927(+) A-I      intronic chr13:103485817(+) A-I      intronic chr13:103485566(+) A-I      intronic chr13:103459005(+) A-I      intronic chr13:103484677(+) A-I      intronic chr13:103455434(+) A-I      intronic chr13:103488792(+) A-I      intronic chr13:103485354(+) A-I      intronic chr13:103485823(+) A-I      intronic chr13:103484658(+) A-I      intronic chr13:103485345(+) A-I      intronic chr13:103488847(+) A-I      intronic chr13:103485408(+) A-I      intronic chr13:103489507(+) A-I      intronic chr13:103487625(+) A-I      intronic chr13:103485925(+) A-I      intronic chr13:103488884(+) A-I      intronic chr13:103485380(+) A-I      intronic chr13:103455115(+) A-I      intronic chr13:103489429(+) A-I      intronic chr13:103455440(+) A-I      intronic chr13:103453812(+) A-I      intronic chr13:103485819(+) A-I      intronic chr13:103455620(+) A-I      intronic chr13:103489432(+) A-I      intronic chr13:103467195(+) A-I      intronic chr13:103458679(+) A-I      intronic chr13:103456741(+) A-I      intronic chr13:103457024(+) A-I      intronic chr13:103455832(+) A-I      intronic chr13:103485427(+) A-I      intronic chr13:103456624(+) A-I      intronic chr13:103488763(+) A-I      intronic chr13:103458861(+) A-I      intronic chr13:103485407(+) A-I      intronic chr13:103455764(+) A-I      intronic chr13:103488145(+) A-I      intronic chr13:103455742(+) A-I      intronic chr13:103453877(+) A-I      intronic chr13:103458783(+) A-I      intronic chr13:103459046(+) A-I      intronic chr13:103484826(+) A-I      intronic chr13:103488742(+) A-I      intronic chr13:103456797(+) A-I      intronic chr13:103456634(+) A-I      intronic chr13:103488144(+) A-I      intronic chr13:103458843(+) A-I      intronic chr13:103489513(+) A-I      intronic chr13:103489408(+) A-I      intronic chr13:103453674(+) A-I      intronic chr13:103453715(+) A-I      intronic chr13:103481197(+) A-I      intronic chr13:103488699(+) A-I      intronic chr13:103458680(+) A-I      intronic chr13:103455119(+) A-I      intronic chr13:103456760(+) A-I      intronic chr13:103458729(+) A-I      intronic chr13:103487547(+) A-I      intronic chr13:103457105(+) A-I      intronic chr13:103481259(+) A-I      intronic chr13:103456904(+) A-I      intronic chr13:103456778(+) A-I      intronic chr13:103485384(+) A-I      intronic chr13:103455706(+) A-I      intronic chr13:103484674(+) A-I      intronic chr13:103459022(+) A-I      intronic chr13:103458648(+) A-I      intronic chr13:103492857(+) A-I      3'UTR chr13:103492913(+) A-I      3'UTR chr13:103492887(+) A-I      3'UTR chr13:103492897(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BIVM	chr13:103488083(+) A-I intron -    15258596 chr13:103488103(+) A-I intron -    15258596 chr13:103488144(+) A-I intron -    15258596 chr13:103488145(+) A-I intron -    15258596 chr13:103455195(+) A-I intron -    22327324 chr13:103455196(+) A-I intron -    22327324 chr13:103455440(+) A-I intron -    21960545 chr13:103455482(+) A-I intron -    21960545 chr13:103455575(+) A-I intron -    21960545 chr13:103455595(+) A-I intron -    21960545 chr13:103455195(+) A-G intron -    22484847 chr13:103455196(+) A-G intron -    22484847 chr13:103455235(+) A-G intron -    22484847 chr13:103455434(+) A-G intron -    22484847 chr13:103455459(+) A-G intron -    22484847 chr13:103455482(+) A-G intron -    22484847 chr13:103455595(+) A-G intron -    22484847 chr13:103455742(+) A-G intron -    22484847 chr13:103456634(+) A-G intron -    22484847 chr13:103458739(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BIVM	chr13:103451431-103451432(+) m6A 5'UTR       24981863 chr13:103451554-103451555(+) m6A 5'UTR       24284625//24981863//22608085 chr13:103451562-103451563(+) m6A 5'UTR       24284625//24981863//22608085 chr13:103459599-103459600(+) m6A 5'UTR//exon//intron       22608085 chr13:103459635-103459636(+) m6A CDS//exon//intron       24284625//22608085 chr13:103459831-103459832(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr13:103459869-103459870(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chr13:103460002-103460003(+) m6A CDS//exon//intron       24284625//24981863//22608085 chr13:103460084-103460085(+) m6A CDS//exon//intron       24981863//22608085 chr13:103468790-103468791(+) m6A 5'UTR//CDS//exon       24981863//22608085 chr13:103491018-103491019(+) m6A CDS//exon       24284625//22608085 chr13:103491064-103491065(+) m6A CDS//exon       24284625//24981863//22608085 chr13:103491080-103491081(+) m6A CDS//exon       24284625//24981863//22608085 chr13:103491959-103491960(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr13:103491988-103491989(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr13:103492002-103492003(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr13:103492010-103492011(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr13:103492066-103492067(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr13:103492129-103492130(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr13:103492171-103492172(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr13:103492231-103492232(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr13:103492252-103492253(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085 chr13:103492267-103492268(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085 chr13:103492278-103492279(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr13:103492452-103492453(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BIVM	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-5p
Interactor2: BIVM

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg