Basic Information:

  VIRBase ID:  

VHID00312300

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-5p:  MIMAT0003413          HS6ST3:  NM_153456     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-5p	HS6ST3
miRBase Accession/Entrez ID	MIMAT0003413	266722
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HS6ST-3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HS6ST3	chr13:97183278(+) A-I      intronic chr13:97182347(+) A-I      intronic chr13:97248488(+) A-I      intronic chr13:97230926(+) A-I      intronic chr13:97286067(+) A-I      intronic chr13:97286090(+) A-I      intronic chr13:97182348(+) A-I      intronic chr13:97182349(+) A-I      intronic chr13:97182370(+) A-I      intronic chr13:97182377(+) A-I      intronic chr13:97287239(+) A-I      intronic chr13:96919212(+) A-I      intronic chr13:96919211(+) A-I      intronic chr13:96762820(+) A-I      intronic chr13:96815690(+) A-I      intronic chr13:97353986(+) A-I      intronic chr13:96957026(+) A-I      intronic chr13:97229131(+) A-I      intronic chr13:97229032(+) A-I      intronic chr13:96818405(+) A-I      intronic chr13:97309652(+) A-I      intronic chr13:96764911(+) A-I      intronic chr13:97168416(+) A-I      intronic chr13:97309738(+) A-I      intronic chr13:96957045(+) A-I      intronic chr13:96816690(+) A-I      intronic chr13:97190845(+) A-I      intronic chr13:97220785(+) A-I      intronic chr13:97472242(+) A-I      intronic chr13:96954099(+) A-I      intronic chr13:97230871(+) A-I      intronic chr13:97111098(+) A-I      intronic chr13:96762830(+) A-I      intronic chr13:97229218(+) A-I      intronic chr13:97230931(+) A-I      intronic chr13:97472232(+) A-I      intronic chr13:96878653(+) A-I      intronic chr13:96957034(+) A-I      intronic chr13:96803569(+) A-I      intronic chr13:97354004(+) A-I      intronic chr13:97009917(+) A-I      intronic chr13:96878680(+) A-I      intronic chr13:96878695(+) A-I      intronic chr13:97229048(+) A-I      intronic chr13:96764732(+) A-I      intronic chr13:97083476(+) A-I      intronic chr13:97169549(+) A-I      intronic chr13:97228986(+) A-I      intronic chr13:97229180(+) A-I      intronic chr13:97003818(+) A-I      intronic chr13:97060360(+) A-I      intronic chr13:96952332(+) A-I      intronic chr13:97060923(+) A-I      intronic chr13:96836334(+) A-I      intronic chr13:97053854(+) A-I      intronic chr13:97061012(+) A-I      intronic chr13:97233750(+) A-I      intronic chr13:97039257(+) A-I      intronic chr13:97233683(+) A-I      intronic chr13:96836295(+) A-I      intronic chr13:96878718(+) A-I      intronic chr13:97229047(+) A-I      intronic chr13:96880685(+) A-I      intronic chr13:97092472(+) A-I      intronic chr13:97249455(+) A-I      intronic chr13:97311063(+) A-I      intronic chr13:97061057(+) A-I      intronic chr13:97220772(+) A-I      intronic chr13:97248642(+) A-I      intronic chr13:96886571(+) A-I      intronic chr13:97061021(+) A-I      intronic chr13:97183245(+) A-I      intronic chr13:97310554(+) A-I      intronic chr13:97182607(+) A-I      intronic chr13:97311241(+) A-I      intronic chr13:97248843(+) A-I      intronic chr13:96933432(+) A-I      intronic chr13:96766642(+) A-I      intronic chr13:96832184(+) A-I      intronic chr13:97286036(+) A-I      intronic chr13:97187126(+) A-I      intronic chr13:97168396(+) A-I      intronic chr13:97266364(+) A-I      intronic chr13:96764930(+) A-I      intronic chr13:96836405(+) A-I      intronic chr13:96958670(+) A-I      intronic chr13:97450751(+) A-I      intronic chr13:97311016(+) A-I      intronic chr13:97330682(+) A-I      intronic chr13:96836344(+) A-I      intronic chr13:97111279(+) A-I      intronic chr13:96766491(+) A-I      intronic chr13:96880576(+) A-I      intronic chr13:97118281(+) A-I      intronic chr13:97229036(+) A-I      intronic chr13:96880755(+) A-I      intronic chr13:97235137(+) A-I      intronic chr13:97248446(+) A-I      intronic chr13:96751242(+) A-I      intronic chr13:97061070(+) A-I      intronic chr13:96751457(+) A-I      intronic chr13:97261486(+) A-I      intronic chr13:97330790(+) A-I      intronic chr13:97060466(+) A-I      intronic chr13:96880740(+) A-I      intronic chr13:97039206(+) A-I      intronic chr13:96954017(+) A-I      intronic chr13:96958648(+) A-I      intronic chr13:96919185(+) A-I      intronic chr13:97111308(+) A-I      intronic chr13:96818381(+) A-I      intronic chr13:96876705(+) A-I      intronic chr13:96958686(+) A-I      intronic chr13:96789788(+) A-I      intronic chr13:96836376(+) A-I      intronic chr13:97248842(+) A-I      intronic chr13:97249303(+) A-I      intronic chr13:96815564(+) A-I      intronic chr13:97111255(+) A-I      intronic chr13:97266297(+) A-I      intronic chr13:97013150(+) A-I      intronic chr13:97238608(+) A-I      intronic chr13:97245518(+) A-I      intronic chr13:97230994(+) A-I      intronic chr13:97235121(+) A-I      intronic chr13:96762952(+) A-I      intronic chr13:96933399(+) A-I      intronic chr13:96789805(+) A-I      intronic chr13:97248398(+) A-I      intronic chr13:96952494(+) A-I      intronic chr13:97098072(+) A-I      intronic chr13:97346442(+) A-I      intronic chr13:96958645(+) A-I      intronic chr13:97013144(+) A-I      intronic chr13:96815613(+) A-I      intronic chr13:96820936(+) A-I      intronic chr13:97378306(+) A-I      intronic chr13:96803555(+) A-I      intronic chr13:96803538(+) A-I      intronic chr13:96764924(+) A-I      intronic chr13:97311060(+) A-I      intronic chr13:96820876(+) A-I      intronic chr13:97053994(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	HS6ST3	chr13:97286036(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HS6ST3	chr13:96743358-96743359(+) m6A CDS       24284625//25456834//22608085 chr13:96743405-96743406(+) m6A CDS       24284625//25456834//22608085 chr13:96743447-96743448(+) m6A CDS       24284625//25456834//22608085 chr13:96743513-96743514(+) m6A CDS       24284625//22608085 chr13:96743618-96743619(+) m6A CDS       24284625//22608085 chr13:96743795-96743796(+) m6A CDS       24284625//25456834//24981863//22608085 chr13:97484803-97484804(+) m6A CDS       24284625//22608085 chr13:97484831-97484832(+) m6A CDS       24284625//22608085 chr13:97485036-97485037(+) m6A CDS       24284625//22575960//22608085 chr13:97485063-97485064(+) m6A CDS       24284625//22608085 chr13:97485075-97485076(+) m6A CDS       24284625//22608085 chr13:97485113-97485114(+) m6A CDS       24284625//22608085 chr13:97485134-97485135(+) m6A CDS       24284625//22608085 chr13:97485237-97485238(+) m6A CDS       24284625//22608085 chr13:97485246-97485247(+) m6A CDS       24284625//22608085 chr13:97485324-97485325(+) m6A CDS       24284625//25456834//24981863//22608085 chr13:97485372-97485373(+) m6A CDS       24284625//25456834//24981863//22608085 chr13:97485410-97485411(+) m6A CDS       24284625//25456834//24981863//22608085 chr13:97485423-97485424(+) m6A CDS       24284625//25456834//24981863//22608085 chr13:97485544-97485545(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr13:97485571-97485572(+) m6A 3'UTR       24284625//25456834//22608085 chr13:97490577-97490578(+) m6A 3'UTR       - chr13:97490582-97490583(+) m6A 3'UTR       - chr13:97490608-97490609(+) m6A 3'UTR       - chr13:97490889-97490890(+) m6A 3'UTR       - chr13:97490931-97490932(+) m6A 3'UTR       - chr13:97490941-97490942(+) m6A 3'UTR       - chr13:97490955-97490956(+) m6A 3'UTR       - chr13:97490996-97490997(+) m6A 3'UTR       - chr13:97491040-97491041(+) m6A 3'UTR       - chr13:97491065-97491066(+) m6A 3'UTR       - chr13:97491103-97491104(+) m6A 3'UTR       - chr13:97491119-97491120(+) m6A 3'UTR       - chr13:97491153-97491154(+) m6A 3'UTR       - chr13:97491167-97491168(+) m6A 3'UTR       - chr13:97491211-97491212(+) m6A 3'UTR       - chr13:97491289-97491290(+) m6A 3'UTR       - chr13:97491325-97491326(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HS6ST3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-5p
Interactor2: HS6ST3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg