Basic Information:

  VIRBase ID:  

VHID00310002

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-5p:  MIMAT0003413          HECW1:  NM_015052     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-5p	HECW1
miRBase Accession/Entrez ID	MIMAT0003413	23072
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NEDL1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HECW1	chr7:43361743(+) A-I      intronic chr7:43337582(+) A-I      intronic chr7:43337570(+) A-I      intronic chr7:43337568(+) A-I      intronic chr7:43337567(+) A-I      intronic chr7:43332657(+) A-I      intronic chr7:43562706(+) A-I      intronic chr7:43527538(+) A-I      intronic chr7:43530498(+) A-I      intronic chr7:43515423(+) A-I      intronic chr7:43515405(+) A-I      intronic chr7:43515397(+) A-I      intronic chr7:43515390(+) A-I      intronic chr7:43515384(+) A-I      intronic chr7:43515383(+) A-I      intronic chr7:43515376(+) A-I      intronic chr7:43332662(+) A-I      intronic chr7:43332661(+) A-I      intronic chr7:43332651(+) A-I      intronic chr7:43332646(+) A-I      intronic chr7:43332645(+) A-I      intronic chr7:43527528(+) A-I      intronic chr7:43505351(+) A-I      intronic chr7:43457216(+) A-I      intronic chr7:43457206(+) A-I      intronic chr7:43457204(+) A-I      intronic chr7:43412883(+) A-I      intronic chr7:43412873(+) A-I      intronic chr7:43412864(+) A-I      intronic chr7:43361748(+) A-I      intronic chr7:43290967(+) A-I      intronic chr7:43414646(+) A-I      intronic chr7:43414647(+) A-I      intronic chr7:43414648(+) A-I      intronic chr7:43414649(+) A-I      intronic chr7:43414652(+) A-I      intronic chr7:43414675(+) A-I      intronic chr7:43414676(+) A-I      intronic chr7:43414679(+) A-I      intronic chr7:43405634(+) A-I      intronic chr7:43539025(+) A-I      intronic chr7:43526085(+) A-I      intronic chr7:43170709(+) A-I      intronic chr7:43363458(+) A-I      intronic chr7:43522267(+) A-I      intronic chr7:43538759(+) A-I      intronic chr7:43324033(+) A-I      intronic chr7:43166854(+) A-I      intronic chr7:43527295(+) A-I      intronic chr7:43523289(+) A-I      intronic chr7:43531401(+) A-I      intronic chr7:43530437(+) A-I      intronic chr7:43303037(+) A-I      intronic chr7:43530496(+) A-I      intronic chr7:43167043(+) A-I      intronic chr7:43265607(+) A-I      intronic chr7:43531372(+) A-I      intronic chr7:43208203(+) A-I      intronic chr7:43539971(+) A-I      intronic chr7:43418319(+) A-I      intronic chr7:43539974(+) A-I      intronic chr7:43538945(+) A-I      intronic chr7:43429956(+) A-I      intronic chr7:43173938(+) A-I      intronic chr7:43527810(+) A-I      intronic chr7:43522479(+) A-I      intronic chr7:43562758(+) A-I      intronic chr7:43530529(+) A-I      intronic chr7:43419677(+) A-I      intronic chr7:43504425(+) A-I      intronic chr7:43170715(+) A-I      intronic chr7:43499249(+) A-I      intronic chr7:43173902(+) A-I      intronic chr7:43405582(+) A-I      intronic chr7:43177412(+) A-I      intronic chr7:43213554(+) A-I      intronic chr7:43531357(+) A-I      intronic chr7:43324024(+) A-I      intronic chr7:43527378(+) A-I      intronic chr7:43167536(+) A-I      intronic chr7:43165210(+) A-I      intronic chr7:43226011(+) A-I      intronic chr7:43593286(+) A-I      intronic chr7:43499371(+) A-I      intronic chr7:43531456(+) A-I      intronic chr7:43499334(+) A-I      intronic chr7:43539811(+) A-I      intronic chr7:43170745(+) A-I      intronic chr7:43499399(+) A-I      intronic chr7:43213602(+) A-I      intronic chr7:43504546(+) A-I      intronic chr7:43539901(+) A-I      intronic chr7:43213603(+) A-I      intronic chr7:43223819(+) A-I      intronic chr7:43538738(+) A-I      intronic chr7:43522438(+) A-I      intronic chr7:43523383(+) A-I      intronic chr7:43538993(+) A-I      intronic chr7:43261233(+) A-I      intronic chr7:43462147(+) A-I      intronic chr7:43505425(+) A-I      intronic chr7:43530490(+) A-I      intronic chr7:43226252(+) A-I      intronic chr7:43166975(+) A-I      intronic chr7:43303016(+) A-I      intronic chr7:43527583(+) A-I      intronic chr7:43298865(+) A-I      intronic chr7:43499411(+) A-I      intronic chr7:43208001(+) A-I      intronic chr7:43527365(+) A-I      intronic chr7:43504621(+) A-I      intronic chr7:43226009(+) A-I      intronic chr7:43526082(+) A-I      intronic chr7:43530380(+) A-I      intronic chr7:43523277(+) A-I      intronic chr7:43505369(+) A-I      intronic chr7:43173745(+) A-I      intronic chr7:43538720(+) A-I      intronic chr7:43539799(+) A-I      intronic chr7:43531375(+) A-I      intronic chr7:43538914(+) A-I      intronic chr7:43173872(+) A-I      intronic chr7:43527587(+) A-I      intronic chr7:43515382(+) A-I      intronic chr7:43504675(+) A-I      intronic chr7:43265442(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HECW1	chr7:43288742-43288743(+) m6A exon//intron       24284625//24981863 chr7:43288845-43288846(+) m6A exon//intron       24284625//24209618//24981863 chr7:43288921-43288922(+) m6A exon//intron       24284625//24209618//24981863 chr7:43288969-43288970(+) m6A exon//intron       24284625//24981863 chr7:43289008-43289009(+) m6A exon//intron       24981863 chr7:43351488-43351489(+) m6A CDS//exon       24284625 chr7:43351560-43351561(+) m6A CDS//exon       24284625 chr7:43482184-43482185(+) m6A CDS       24209618 chr7:43483867-43483868(+) m6A CDS       24284625 chr7:43483879-43483880(+) m6A CDS       24284625 chr7:43483907-43483908(+) m6A CDS       24284625 chr7:43483990-43483991(+) m6A CDS       24284625//25456834//24981863 chr7:43484012-43484013(+) m6A CDS       24284625//25456834//24981863//22575960 chr7:43484050-43484051(+) m6A CDS       24284625//25456834//24981863//22575960 chr7:43484072-43484073(+) m6A CDS       24284625//25456834//24981863//22575960 chr7:43484113-43484114(+) m6A CDS       24284625//24209618//25456834//24981863//22575960 chr7:43484158-43484159(+) m6A CDS       24284625//24209618//25456834//24981863//22575960 chr7:43484272-43484273(+) m1A CDS       26863196 chr7:43484425-43484426(+) m6A CDS       24284625//24981863 chr7:43484433-43484434(+) m6A CDS       24284625//24981863 chr7:43484442-43484443(+) m6A CDS       24284625//24981863 chr7:43484548-43484549(+) m6A CDS       24284625//25456834//24981863 chr7:43484581-43484582(+) m6A CDS       24284625//25456834//24981863 chr7:43484617-43484618(+) m6A CDS       24284625//25456834//24981863 chr7:43484770-43484771(+) m6A CDS       24284625//25456834 chr7:43484938-43484939(+) m6A CDS       24284625//25456834//24981863 chr7:43484998-43484999(+) m6A CDS       24284625//25456834//24981863 chr7:43485046-43485047(+) m6A CDS       24284625//25456834//24981863 chr7:43508661-43508662(+) m6A CDS       - chr7:43508690-43508691(+) m6A CDS       - chr7:43519221-43519222(+) m6A CDS//exon       - chr7:43548707-43548708(+) m6A CDS//intron       - chr7:43590098-43590099(+) m6A CDS       24981863 chr7:43594288-43594289(+) m6A CDS       - chr7:43601501-43601502(+) m6A CDS       24981863 chr7:43601515-43601516(+) m6A CDS       24981863 chr7:43601527-43601528(+) m6A 3'UTR       24981863 chr7:43601534-43601535(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HECW1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-5p
Interactor2: HECW1

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg