Basic Information:

  VIRBase ID:  

VHID00309460

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-5p:  MIMAT0003413          KLF4:  NM_004235     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-5p	KLF4
miRBase Accession/Entrez ID	MIMAT0003413	9314
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EZF//GKLF

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KLF4	chr9:110247697-110247698(-) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr9:110247776-110247777(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22575960//22608085 chr9:110247841-110247842(-) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr9:110247855-110247856(-) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr9:110248023-110248024(-) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr9:110248065-110248066(-) m6A CDS//exon       24284625//24981863//27773535//22575960//22608085 chr9:110248124-110248125(-) m6A CDS//exon       24284625//24981863//27773535//27371828//22575960//22608085 chr9:110248145-110248146(-) m6A CDS//exon       24284625//24981863//27773535//27371828//22575960//22608085 chr9:110248199-110248200(-) m6A CDS//exon       24284625//24981863//27773535//22575960//22608085 chr9:110249317-110249318(-) m6A CDS//exon       24284625//24981863//27773535//22575960//22608085 chr9:110249356-110249357(-) m6A CDS//exon       24284625//24981863//27773535//22575960 chr9:110249395-110249396(-) m6A CDS//exon       24284625//24981863//27773535 chr9:110249512-110249513(-) m6A exon//intron       24284625//24981863//27773535 chr9:110249688-110249689(-) m6A CDS//exon//intron       24284625//25456834//24981863//27773535 chr9:110249731-110249732(-) m6A CDS//exon//intron       24284625//25456834//24981863//27773535//27773536 chr9:110249801-110249802(-) m6A CDS//exon//intron       24284625//24981863//27371828//27773536 chr9:110250048-110250049(-) m6A CDS//exon//intron       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr9:110250108-110250109(-) m6A CDS//exon//intron       24284625//25456834//24981863//27371828//27773536//22575960 chr9:110250357-110250358(-) m6A CDS//exon//intron       24284625//24981863 chr9:110250363-110250364(-) m6A CDS//exon//intron       24284625//24981863 chr9:110250388-110250389(-) m6A CDS//exon//intron       24284625//24981863 chr9:110250456-110250457(-) m6A CDS//exon//intron       24284625//24981863 chr9:110250585-110250586(-) m6A exon//intron       24284625 chr9:110251239-110251240(-) m6A CDS//exon       24284625 chr9:110251406-110251407(-) m6A 5'UTR//intron       24284625//27773535 chr9:110251473-110251474(-) m6A 5'UTR//exon       24284625//27773535 chr9:110251616-110251617(-) m6A 5'UTR//exon       24284625//24981863//27773535 chr9:110251634-110251635(-) m6A 5'UTR//exon       24284625//24981863//27773535 chr9:110251689-110251690(-) m6A 5'UTR//exon       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KLF4	Cytoplasm NSCLC tissue     29665649 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus NSCLC tissue     29665649 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-5p
Interactor2: KLF4

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg