Detail Information

Basic Information:


  VIRBase ID:  

VHID00309142

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-5p:           TIAL1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART5-5p TIAL1
miRBase
Accession/Entrez ID		 MIMAT0003413 7073
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - TCBP//TIAR

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TIAL1
chr10:121344752(-) A-I      intronic
chr10:121350208(-) A-I      intronic
chr10:121350659(-) A-I      intronic
chr10:121351004(-) A-I      intronic
chr10:121348074(-) A-I      intronic
chr10:121348069(-) A-I      intronic
chr10:121347953(-) A-I      intronic
chr10:121350140(-) A-I      intronic
chr10:121350018(-) A-I      intronic
chr10:121350175(-) A-I      intronic
chr10:121350643(-) A-I      intronic
chr10:121348897(-) A-I      intronic
chr10:121344513(-) A-I      intronic
chr10:121348029(-) A-I      intronic
chr10:121350110(-) A-I      intronic
chr10:121337367(-) A-I      intronic
chr10:121348137(-) A-I      intronic
chr10:121347932(-) A-I      intronic
chr10:121348023(-) A-I      intronic
chr10:121348093(-) A-I      intronic
chr10:121350183(-) A-I      intronic
chr10:121348887(-) A-I      intronic
chr10:121350184(-) A-I      intronic
chr10:121348016(-) A-I      intronic
chr10:121348990(-) A-I      intronic
chr10:121348893(-) A-I      intronic
chr10:121348123(-) A-I      intronic
chr10:121348112(-) A-I      intronic
chr10:121348020(-) A-I      intronic
chr10:121350733(-) A-I      intronic
chr10:121348815(-) A-I      intronic
chr10:121337615(-) A-I      intronic
chr10:121348026(-) A-I      intronic
chr10:121347994(-) A-I      intronic
chr10:121348751(-) A-I      intronic
chr10:121347918(-) A-I      intronic
chr10:121350665(-) A-I      intronic
chr10:121347883(-) A-I      intronic
chr10:121354315(-) A-I      intronic
chr10:121348051(-) A-I      intronic
chr10:121348864(-) A-I      intronic
chr10:121350039(-) A-I      intronic
chr10:121350050(-) A-I      intronic
chr10:121348882(-) A-I      intronic
chr10:121348846(-) A-I      intronic
chr10:121348038(-) A-I      intronic
chr10:121348895(-) A-I      intronic
chr10:121344737(-) A-I      intronic
chr10:121350139(-) A-I      intronic
chr10:121350837(-) A-I      intronic
chr10:121348049(-) A-I      intronic
chr10:121348088(-) A-I      intronic
chr10:121347885(-) A-I      intronic
chr10:121350850(-) A-I      intronic
chr10:121348145(-) A-I      intronic
chr10:121344523(-) A-I      intronic
chr10:121349979(-) A-I      intronic
chr10:121347993(-) A-I      intronic
chr10:121350017(-) A-I      intronic
chr10:121348034(-) A-I      intronic
chr10:121350065(-) A-I      intronic
chr10:121348035(-) A-I      intronic
chr10:121348936(-) A-I      intronic
chr10:121350836(-) A-I      intronic
chr10:121350160(-) A-I      intronic
chr10:121350750(-) A-I      intronic
chr10:121347963(-) A-I      intronic
chr10:121344374(-) A-I      intronic
chr10:121349951(-) A-I      intronic
chr10:121348814(-) A-I      intronic
chr10:121348129(-) A-I      intronic
chr10:121350918(-) A-I      intronic
chr10:121350795(-) A-I      intronic
chr10:121347938(-) A-I      intronic
chr10:121349967(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TIAL1
chr10:121347938(-) A-I intron -    22327324
chr10:121347883(-) A-G intron -    22484847
chr10:121347885(-) A-G intron -    22484847
chr10:121347938(-) A-G intron -    22484847
chr10:121347953(-) A-G intron -    22484847
chr10:121347963(-) A-G intron -    22484847
chr10:121348020(-) A-G intron -    22484847
chr10:121348026(-) A-G intron -    22484847
chr10:121348034(-) A-G intron -    22484847
chr10:121348035(-) A-G intron -    22484847
chr10:121348038(-) A-G intron -    22484847
chr10:121348088(-) A-G intron -    22484847
chr10:121348093(-) A-G intron -    22484847
chr10:121348137(-) A-G intron -    22484847
chr10:121348864(-) A-G intron -    22484847
chr10:121348882(-) A-G intron -    22484847
chr10:121348887(-) A-G intron -    22484847
chr10:121348893(-) A-G intron -    22484847
chr10:121350643(-) A-G intron -    22484847
chr10:121350665(-) A-G intron -    22484847
chr10:121350836(-) A-G intron -    22484847
chr10:121350837(-) A-G intron -    22484847
chr10:121350850(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TIAL1
chr10:121334258-121334259(-) m6A 3'UTR       27773535
chr10:121334432-121334433(-) m6A 3'UTR       27773535
chr10:121334520-121334521(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr10:121334533-121334534(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr10:121334581-121334582(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr10:121334608-121334609(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr10:121334619-121334620(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr10:121334721-121334722(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr10:121334784-121334785(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr10:121334926-121334927(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr10:121334947-121334948(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr10:121334972-121334973(-) m6A 3'UTR//exon       24209618//24981863//27773535//22608085
chr10:121335024-121335025(-) m6A 3'UTR//exon       24284625//24981863//28052920//27773535//22608085
chr10:121335054-121335055(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//22608085
chr10:121335100-121335101(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr10:121335103-121335104(-) Tm 3'UTR//exon       -
chr10:121335112-121335113(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr10:121335169-121335170(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr10:121335184-121335185(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr10:121335248-121335249(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//28052920//26404942//27773535//22575960//22608085
chr10:121336202-121336203(-) m6A 3'UTR//CDS//exon       26404942//27773535
chr10:121336218-121336219(-) m6A 3'UTR//CDS//exon       26404942//27773535
chr10:121338265-121338266(-) m6A 3'UTR//CDS//exon       24981863
chr10:121338285-121338286(-) m6A 3'UTR//CDS//exon       24981863
chr10:121356148-121356149(-) Y 5'UTR//exon       26075521
chr10:121356429-121356430(-) m6A 5'UTR//exon       25456834//24981863//27371828//22575960
chr10:121356445-121356446(-) m6A 5'UTR//exon       25456834//24981863//27371828//22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TIAL1
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART5-5p
Interactor2: TIAL1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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