Basic Information:

  VIRBase ID:  

VHID00308884

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-5p:  MIMAT0003413          MAP2K3:  NM_002756     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-5p	MAP2K3
miRBase Accession/Entrez ID	MIMAT0003413	5606
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MAPKK3//MEK3//MKK3//PRKMK3//SAPKK-2//SAPKK2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MAP2K3	chr17:21211660(+) A-I      intronic chr17:21211643(+) A-I      intronic chr17:21211577(+) A-I      intronic chr17:21195761(+) A-I      intronic chr17:21195794(+) A-I      intronic chr17:21194142(+) A-I      intronic chr17:21195982(+) A-I      intronic chr17:21216080(+) A-I      intronic chr17:21216077(+) A-I      intronic chr17:21194080(+) A-I      intronic chr17:21195799(+) A-I      intronic chr17:21195798(+) A-I      intronic chr17:21195924(+) A-I      intronic chr17:21195939(+) A-I      intronic chr17:21211508(+) A-I      intronic chr17:21195866(+) A-I      intronic chr17:21195891(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MAP2K3	chr17:21188050-21188051(+) m6A 5'UTR//exon       24209618 chr17:21188219-21188220(+) m6A 5'UTR//exon       24284625//24209618//22575960 chr17:21191305-21191306(+) m6A CDS//intron       24284625 chr17:21199460-21199461(+) m6A 3'UTR//5'UTR//CDS//intron       - chr17:21202200-21202201(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr17:21202206-21202207(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr17:21202214-21202215(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr17:21202233-21202234(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr17:21203808-21203809(+) m6A exon//intron       24284625 chr17:21203857-21203858(+) m6A 3'UTR//CDS//exon       24284625 chr17:21203897-21203898(+) m6A 3'UTR//CDS//exon       24284625 chr17:21204204-21204205(+) m6A 3'UTR//CDS//exon       24284625//22575960 chr17:21204234-21204235(+) m6A 3'UTR//CDS       24284625//22575960 chr17:21204240-21204241(+) m6A 3'UTR//CDS       24284625//22575960 chr17:21205485-21205486(+) m6A 3'UTR//CDS       24284625 chr17:21205497-21205498(+) m6A 3'UTR//CDS       24284625 chr17:21205527-21205528(+) m6A 3'UTR//CDS       24284625 chr17:21205545-21205546(+) m6A 3'UTR//CDS       24284625 chr17:21207818-21207819(+) m6A 3'UTR//CDS       24284625 chr17:21208387-21208388(+) m6A 3'UTR//CDS       24284625//24981863 chr17:21215074-21215075(+) m6A exon//intron       24284625 chr17:21215577-21215578(+) m6A 3'UTR//CDS//exon       24284625 chr17:21216814-21216815(+) m6A 3'UTR//CDS//exon       24284625 chr17:21217138-21217139(+) m6A 3'UTR//intron       25456834 chr17:21217485-21217486(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942 chr17:21217498-21217499(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942 chr17:21217534-21217535(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942 chr17:21217556-21217557(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960 chr17:21217657-21217658(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960 chr17:21217721-21217722(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr17:21217785-21217786(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:21217812-21217813(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:21217952-21217953(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960 chr17:21218044-21218045(+) m6A 3'UTR       24284625 chr17:21218099-21218100(+) m6A 3'UTR       24284625 chr17:21218388-21218389(+) m6A 3'UTR       24284625//24981863//26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MAP2K3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-5p
Interactor2: MAP2K3

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg