Basic Information:

  VIRBase ID:  

VHID00308875

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-5p:  MIMAT0003413          PRKCI:  NM_002740     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-5p	PRKCI
miRBase Accession/Entrez ID	MIMAT0003413	5584
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DXS1179E//nPKC-iota//PKCI

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PRKCI	chr3:169960600(+) A-I      intronic chr3:169960711(+) A-I      intronic chr3:169964943(+) A-I      intronic chr3:169965079(+) A-I      intronic chr3:169965424(+) A-I      intronic chr3:169966775(+) A-I      intronic chr3:169976164(+) A-I      intronic chr3:169976194(+) A-I      intronic chr3:169980362(+) A-I      intronic chr3:169980460(+) A-I      intronic chr3:169980471(+) A-I      intronic chr3:169982091(+) A-I      intronic chr3:169982131(+) A-I      intronic chr3:169982172(+) A-I      intronic chr3:169986147(+) A-I      intronic chr3:169986255(+) A-I      intronic chr3:169986746(+) A-I      intronic chr3:169986759(+) A-I      intronic chr3:169986772(+) A-I      intronic chr3:169991341(+) A-I      intronic chr3:169991374(+) A-I      intronic chr3:169991417(+) A-I      intronic chr3:169991964(+) A-I      intronic chr3:169991971(+) A-I      intronic chr3:169992013(+) A-I      intronic chr3:169992019(+) A-I      intronic chr3:169992132(+) A-I      intronic chr3:169996297(+) A-I      intronic chr3:169996928(+) A-I      intronic chr3:170005539(+) A-I      intronic chr3:169996933(+) A-I      intronic chr3:170003007(+) A-I      intronic chr3:169964924(+) A-I      intronic chr3:169976193(+) A-I      intronic chr3:169982250(+) A-I      intronic chr3:169993937(+) A-I      intronic chr3:170003078(+) A-I      intronic chr3:170003127(+) A-I      intronic chr3:170003576(+) A-I      intronic chr3:170003589(+) A-I      intronic chr3:170003594(+) A-I      intronic chr3:170003597(+) A-I      intronic chr3:170003817(+) A-I      intronic chr3:170003830(+) A-I      intronic chr3:170003989(+) A-I      intronic chr3:170004859(+) A-I      intronic chr3:170004873(+) A-I      intronic chr3:170005444(+) A-I      intronic chr3:170005511(+) A-I      intronic chr3:170005538(+) A-I      intronic chr3:170005546(+) A-I      intronic chr3:170005553(+) A-I      intronic chr3:170005919(+) A-I      intronic chr3:170005923(+) A-I      intronic chr3:170006495(+) A-I      intronic chr3:170007383(+) A-I      intronic chr3:170007806(+) A-I      intronic chr3:170007810(+) A-I      intronic chr3:170007811(+) A-I      intronic chr3:170007826(+) A-I      intronic chr3:170008753(+) A-I      intronic chr3:170008766(+) A-I      intronic chr3:170008813(+) A-I      intronic chr3:170008835(+) A-I      intronic chr3:170011658(+) A-I      intronic chr3:170012893(+) A-I      intronic chr3:170015858(+) A-I      intronic chr3:169986803(+) A-I      intronic chr3:169960588(+) A-I      intronic chr3:170003324(+) A-I      intronic chr3:169956563(+) A-I      intronic chr3:169946253(+) A-I      intronic chr3:169946283(+) A-I      intronic chr3:169947127(+) A-I      intronic chr3:169947187(+) A-I      intronic chr3:169947220(+) A-I      intronic chr3:169953402(+) A-I      intronic chr3:169953555(+) A-I      intronic chr3:169953854(+) A-I      intronic chr3:169956043(+) A-I      intronic chr3:169956072(+) A-I      intronic chr3:169956479(+) A-I      intronic chr3:169956522(+) A-I      intronic chr3:169956614(+) A-I      intronic chr3:169976152(+) A-I      intronic chr3:169976157(+) A-I      intronic chr3:169976171(+) A-I      intronic chr3:169986802(+) A-I      intronic chr3:170004717(+) A-I      intronic chr3:170004723(+) A-I      intronic chr3:170004734(+) A-I      intronic chr3:170004747(+) A-I      intronic chr3:169956618(+) A-I      intronic chr3:169993941(+) A-I      intronic chr3:169996238(+) A-I      intronic chr3:169959733(+) A-I      intronic chr3:169959736(+) A-I      intronic chr3:169959737(+) A-I      intronic chr3:169959867(+) A-I      intronic chr3:169960179(+) A-I      intronic chr3:169960238(+) A-I      intronic chr3:169960576(+) A-I      intronic chr3:170003335(+) A-I      intronic chr3:170008744(+) A-I      intronic chr3:170004708(+) A-I      intronic chr3:170003295(+) A-I      intronic chr3:170003290(+) A-I      intronic chr3:170003273(+) A-I      intronic chr3:170003272(+) A-I      intronic chr3:170008844(+) A-I      intronic chr3:170008830(+) A-I      intronic chr3:170008809(+) A-I      intronic chr3:170008777(+) A-I      intronic chr3:170008774(+) A-I      intronic chr3:170008760(+) A-I      intronic chr3:170008748(+) A-I      intronic chr3:170008740(+) A-I      intronic chr3:170008714(+) A-I      intronic chr3:170008706(+) A-I      intronic chr3:170005548(+) A-I      intronic chr3:169956053(+) A-I      intronic chr3:169953970(+) A-I      intronic chr3:169967395(+) A-I      intronic chr3:170005519(+) A-I      intronic chr3:170013201(+) A-I      intronic chr3:169995289(+) A-I      intronic chr3:170005536(+) A-I      intronic chr3:169954440(+) A-I      intronic chr3:170011599(+) A-I      intronic chr3:169976187(+) A-I      intronic chr3:170004958(+) A-I      intronic chr3:169960598(+) A-I      intronic chr3:170012720(+) A-I      intronic chr3:170008803(+) A-I      intronic chr3:169981462(+) A-I      intronic chr3:169954054(+) A-I      intronic chr3:170011505(+) A-I      intronic chr3:170005063(+) A-I      intronic chr3:170004998(+) A-I      intronic chr3:169954592(+) A-I      intronic chr3:170003074(+) A-I      intronic chr3:170004967(+) A-I      intronic chr3:169954551(+) A-I      intronic chr3:170006394(+) A-I      intronic chr3:170012850(+) A-I      intronic chr3:169994914(+) A-I      intronic chr3:169967535(+) A-I      intronic chr3:169993807(+) A-I      intronic chr3:169964021(+) A-I      intronic chr3:169954515(+) A-I      intronic chr3:170011721(+) A-I      intronic chr3:170002997(+) A-I      intronic chr3:170005780(+) A-I      intronic chr3:169980541(+) A-I      intronic chr3:169970017(+) A-I      intronic chr3:169954558(+) A-I      intronic chr3:169994773(+) A-I      intronic chr3:170002931(+) A-I      intronic chr3:170007750(+) A-I      intronic chr3:169954576(+) A-I      intronic chr3:169995233(+) A-I      intronic chr3:169955893(+) A-I      intronic chr3:169960624(+) A-I      intronic chr3:170008764(+) A-I      intronic chr3:170005629(+) A-I      intronic chr3:170003558(+) A-I      intronic chr3:170008670(+) A-I      intronic chr3:170009229(+) A-I      intronic chr3:170004894(+) A-I      intronic chr3:170003128(+) A-I      intronic chr3:169959777(+) A-I      intronic chr3:169956796(+) A-I      intronic chr3:169946343(+) A-I      intronic chr3:170012915(+) A-I      intronic chr3:169991552(+) A-I      intronic chr3:169994275(+) A-I      intronic chr3:170011608(+) A-I      intronic chr3:170021713(+) A-I      3'UTR chr3:170021638(+) A-I      3'UTR chr3:170021560(+) A-I      3'UTR chr3:170021688(+) A-I      3'UTR chr3:169959481(+) A-I      intronic chr3:169959763(+) A-I      intronic chr3:170005473(+) A-I      intronic chr3:170016377(+) A-I      intronic chr3:170007740(+) A-I      intronic chr3:169959798(+) A-I      intronic chr3:170005571(+) A-I      intronic chr3:170003667(+) A-I      intronic chr3:170011652(+) A-I      intronic chr3:169947203(+) A-I      intronic chr3:169954637(+) A-I      intronic chr3:170003556(+) A-I      intronic chr3:170003662(+) A-I      intronic chr3:170007688(+) A-I      intronic chr3:170004916(+) A-I      intronic chr3:169960232(+) A-I      intronic chr3:170005887(+) A-I      intronic chr3:169960094(+) A-I      intronic chr3:170003119(+) A-I      intronic chr3:170010407(+) A-I      intronic chr3:169959712(+) A-I      intronic chr3:170005561(+) A-I      intronic chr3:170008907(+) A-I      intronic chr3:169954559(+) A-I      intronic chr3:170005034(+) A-I      intronic chr3:169954409(+) A-I      intronic chr3:170006384(+) A-I      intronic chr3:170013327(+) A-I      intronic chr3:170008769(+) A-I      intronic chr3:170005599(+) A-I      intronic chr3:170003735(+) A-I      intronic chr3:169980454(+) A-I      intronic chr3:169956737(+) A-I      intronic chr3:169982207(+) A-I      intronic chr3:170011649(+) A-I      intronic chr3:170011558(+) A-I      intronic chr3:170006279(+) A-I      intronic chr3:170005822(+) A-I      intronic chr3:169969982(+) A-I      intronic chr3:169996444(+) A-I      intronic chr3:170005680(+) A-I      intronic chr3:169946278(+) A-I      intronic chr3:169982816(+) A-I      intronic chr3:170003066(+) A-I      intronic chr3:169946256(+) A-I      intronic chr3:169987581(+) A-I      intronic chr3:170005488(+) A-I      intronic chr3:170010663(+) A-I      intronic chr3:170004868(+) A-I      intronic chr3:169992059(+) A-I      intronic chr3:170004952(+) A-I      intronic chr3:170003129(+) A-I      intronic chr3:170005437(+) A-I      intronic chr3:169984700(+) A-I      intronic chr3:170007429(+) A-I      intronic chr3:170011527(+) A-I      intronic chr3:169947306(+) A-I      intronic chr3:170008845(+) A-I      intronic chr3:169964950(+) A-I      intronic chr3:170005779(+) A-I      intronic chr3:170003644(+) A-I      intronic chr3:169959528(+) A-I      intronic chr3:169993855(+) A-I      intronic chr3:169959921(+) A-I      intronic chr3:169983616(+) A-I      intronic chr3:170008801(+) A-I      intronic chr3:169987696(+) A-I      intronic chr3:169964344(+) A-I      intronic chr3:169954641(+) A-I      intronic chr3:169947206(+) A-I      intronic chr3:169949713(+) A-I      intronic chr3:170007580(+) A-I      intronic chr3:170008765(+) A-I      intronic chr3:170003141(+) A-I      intronic chr3:169953835(+) A-I      intronic chr3:170005512(+) A-I      intronic chr3:170013207(+) A-I      intronic chr3:170003552(+) A-I      intronic chr3:170012879(+) A-I      intronic chr3:170012880(+) A-I      intronic chr3:169987690(+) A-I      intronic chr3:170005591(+) A-I      intronic chr3:170005846(+) A-I      intronic chr3:169996879(+) A-I      intronic chr3:170007816(+) A-I      intronic chr3:169949859(+) A-I      intronic chr3:169954610(+) A-I      intronic chr3:169954030(+) A-I      intronic chr3:170005681(+) A-I      intronic chr3:169954583(+) A-I      intronic chr3:170017116(+) A-I      intronic chr3:170005587(+) A-I      intronic chr3:169946292(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PRKCI	chr3:170021575(+) A-I exon 3'UTR    15258596 chr3:170021646(+) A-I exon 3'UTR    15258596 chr3:170021654(+) A-I exon 3'UTR    15258596 chr3:170021688(+) A-I exon 3'UTR    15258596 chr3:169946249(+) A-G intron -    22484847 chr3:169946256(+) A-G intron -    22484847 chr3:169946278(+) A-G intron -    22484847 chr3:169946343(+) A-G intron -    22484847 chr3:169947203(+) A-G intron -    22484847 chr3:169953471(+) A-G intron -    22484847 chr3:169953970(+) A-G intron -    22484847 chr3:169954030(+) A-G intron -    22484847 chr3:169955969(+) A-G intron -    22484847 chr3:169956460(+) A-G intron -    22484847 chr3:169957681(+) A-G intron -    22484847 chr3:169964950(+) A-G intron -    22484847 chr3:169993807(+) A-G intron -    22484847 chr3:170002997(+) A-G intron -    22484847 chr3:170003074(+) A-G intron -    22484847 chr3:170003129(+) A-G intron -    22484847 chr3:170004867(+) A-G intron -    22484847 chr3:170004868(+) A-G intron -    22484847 chr3:170004944(+) A-G intron -    22484847 chr3:170004952(+) A-G intron -    22484847 chr3:170004967(+) A-G intron -    22484847 chr3:170004998(+) A-G intron -    22484847 chr3:170008801(+) A-G intron -    22484847 chr3:170008804(+) A-G intron -    22484847 chr3:170011643(+) A-G intron -    22484847 chr3:170011678(+) A-G intron -    22484847 chr3:170003309(+) A-G intron -    22484847 chr3:170004730(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRKCI	chr3:170020969-170020970(+) m6A 3'UTR//exon       27773535 chr3:170021024-170021025(+) m6A 3'UTR//exon       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PRKCI	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-5p
Interactor2: PRKCI

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg