Basic Information:

  VIRBase ID:  

VHID00308411

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART5-5p:  MIMAT0003413          GRM1:  NM_001278065     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART5-5p	GRM1
miRBase Accession/Entrez ID	MIMAT0003413	2911
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GPRC1A//MGLU1//MGLUR1//PPP1R85//SCA44//SCAR13

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GRM1	chr6:146383114(+) A-I      intronic chr6:146494405(+) A-I      intronic chr6:146383061(+) A-I      intronic chr6:146383090(+) A-I      intronic chr6:146383062(+) A-I      intronic chr6:146383099(+) A-I      intronic chr6:146494419(+) A-I      intronic chr6:146494366(+) A-I      intronic chr6:146494370(+) A-I      intronic chr6:146494323(+) A-I      intronic chr6:146494257(+) A-I      intronic chr6:146494276(+) A-I      intronic chr6:146500675(+) A-I      intronic chr6:146494406(+) A-I      intronic chr6:146501214(+) A-I      intronic chr6:146494258(+) A-I      intronic chr6:146494889(+) A-I      intronic chr6:146494446(+) A-I      intronic chr6:146480970(+) A-I      intronic chr6:146495014(+) A-I      intronic chr6:146403457(+) A-I      intronic chr6:146501252(+) A-I      intronic chr6:146500820(+) A-I      intronic chr6:146494376(+) A-I      intronic chr6:146494516(+) A-I      intronic chr6:146494254(+) A-I      intronic chr6:146494387(+) A-I      intronic chr6:146494458(+) A-I      intronic chr6:146494968(+) A-I      intronic chr6:146494379(+) A-I      intronic chr6:146480990(+) A-I      intronic chr6:146494377(+) A-I      intronic chr6:146633294(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GRM1	chr6:146351238-146351239(+) m6A CDS//exon       22575960 chr6:146755101-146755102(+) m6A 3'UTR//CDS       22575960 chr6:146755125-146755126(+) m6A 3'UTR//CDS       22575960 chr6:146755699-146755700(+) m6A 3'UTR//CDS       25456834 chr6:146755715-146755716(+) m6A 3'UTR//CDS       25456834 chr6:146755735-146755736(+) m6A 3'UTR//CDS       25456834 chr6:146755754-146755755(+) m6A 3'UTR//CDS       25456834 chr6:146756324-146756325(+) m6A 3'UTR       25456834//22575960 chr6:146756337-146756338(+) m6A 3'UTR       25456834//22575960 chr6:146756396-146756397(+) m6A 3'UTR       25456834 chr6:146756433-146756434(+) m6A 3'UTR       25456834 chr6:146756464-146756465(+) m6A 3'UTR       25456834 chr6:146756510-146756511(+) m6A 3'UTR       25456834 chr6:146756528-146756529(+) m6A 3'UTR       25456834 chr6:146756826-146756827(+) m6A 3'UTR       25456834 chr6:146756854-146756855(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GRM1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART5-5p
Interactor2: GRM1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg