Basic Information:

  VIRBase ID:  

VHID00305902

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART4-5p:  MIMAT0003412          MSL3:  NM_078629     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART4-5p	MSL3
miRBase Accession/Entrez ID	MIMAT0003412	10943
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MRSXBA//MRXS36//MRXSBA//MSL3L1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MSL3	chrX:11787835(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MSL3	chrX:11779053-11779054(+) m6A 5'UTR//CDS//exon       27773535 chrX:11779092-11779093(+) m6A exon//intron       27773535 chrX:11779104-11779105(+) m6A exon//intron       27773535 chrX:11779133-11779134(+) m6A exon//intron       27773535 chrX:11779141-11779142(+) m6A exon//intron       27773535 chrX:11779648-11779649(+) m6A 5'UTR//CDS//exon//intron       24981863//22608085 chrX:11779692-11779693(+) m6A 5'UTR//CDS//exon//intron       24981863//22608085 chrX:11780256-11780257(+) m6A 3'UTR//5'UTR//CDS//exon       24981863//22608085 chrX:11780269-11780270(+) m6A 3'UTR//5'UTR//CDS//exon       24981863//22608085 chrX:11780293-11780294(+) m6A 3'UTR//CDS//exon       24981863//22608085 chrX:11780963-11780964(+) m6A 3'UTR//CDS//exon       24981863 chrX:11782268-11782269(+) m6A exon//intron       - chrX:11782283-11782284(+) m6A exon//intron       - chrX:11783597-11783598(+) m6A 3'UTR//CDS//intron       - chrX:11783669-11783670(+) m6A 3'UTR//CDS       - chrX:11787199-11787200(+) m6A exon//intron       - chrX:11787212-11787213(+) m6A exon//intron       - chrX:11790743-11790744(+) m6A 3'UTR//CDS       - chrX:11793178-11793179(+) m6A 3'UTR//CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MSL3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART4-5p
Interactor2: MSL3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg