Basic Information:

  VIRBase ID:  

VHID00305466

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART4-5p:  MIMAT0003412          ZNF24:  NM_001308123     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART4-5p	ZNF24
miRBase Accession/Entrez ID	MIMAT0003412	7572
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KOX17//RSG-A//Zfp191//ZNF191//ZSCAN3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF24	chr18:32912236-32912237(-) m6A 3'UTR       27773535 chr18:32912259-32912260(-) m6A 3'UTR       27773535 chr18:32912370-32912371(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr18:32912439-32912440(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr18:32912468-32912469(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr18:32912519-32912520(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr18:32912526-32912527(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr18:32912561-32912562(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr18:32912573-32912574(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085 chr18:32912700-32912701(-) m6A 3'UTR       24284625//22608085 chr18:32913298-32913299(-) m6A 3'UTR       24981863//27773535 chr18:32913394-32913395(-) m6A 3'UTR       24981863//27773535 chr18:32913416-32913417(-) m6A 3'UTR       27773535 chr18:32914823-32914824(-) m6A 3'UTR       25456834//24981863 chr18:32914833-32914834(-) m6A 3'UTR       25456834//24981863 chr18:32914838-32914839(-) m6A 3'UTR       25456834//24981863 chr18:32915775-32915776(-) m6A 3'UTR       26404942 chr18:32915783-32915784(-) m6A 3'UTR       26404942 chr18:32915804-32915805(-) m6A 3'UTR       26404942 chr18:32916432-32916433(-) m6A 3'UTR       27773535 chr18:32916548-32916549(-) Y 3'UTR       25219674 chr18:32916614-32916615(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr18:32916633-32916634(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr18:32916669-32916670(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr18:32916767-32916768(-) m6A 3'UTR       24981863//27773535//22608085 chr18:32916777-32916778(-) m6A 3'UTR       24981863//27773535//22608085 chr18:32916873-32916874(-) m6A 3'UTR       24981863//27773535//22608085 chr18:32916917-32916918(-) m6A 3'UTR       24981863//27773535//22608085 chr18:32916989-32916990(-) m6A 3'UTR       24981863//26404942//27773535//22608085 chr18:32917002-32917003(-) m6A 3'UTR       24981863//26404942//27773535//22608085 chr18:32917139-32917140(-) m6A 3'UTR       24209618//24981863//26404942//27773535//22608085 chr18:32917219-32917220(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr18:32917234-32917235(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr18:32917246-32917247(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr18:32917303-32917304(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr18:32917387-32917388(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr18:32917433-32917434(-) Y 3'UTR//CDS       26075521 chr18:32917471-32917472(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr18:32917528-32917529(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr18:32917555-32917556(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr18:32917608-32917609(-) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr18:32917719-32917720(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr18:32918106-32918107(-) m6A 3'UTR//intron       27773535 chr18:32919839-32919840(-) m6A CDS       24284625//24981863//27371828//27773536 chr18:32919899-32919900(-) m6A CDS       24284625//24981863//27371828//27773536//22608085 chr18:32920200-32920201(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr18:32920215-32920216(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr18:32920286-32920287(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr18:32920347-32920348(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr18:32920389-32920390(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr18:32920474-32920475(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//22608085 chr18:32920486-32920487(-) m6A CDS       24284625//24209618//24981863//27371828//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF24	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART4-5p
Interactor2: ZNF24

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg