Basic Information:

  VIRBase ID:  

VHID00305173

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART4-5p:  MIMAT0003412          PIM1:  NM_002648     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART4-5p	PIM1
miRBase Accession/Entrez ID	MIMAT0003412	5292
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PIM

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PIM1	chr6:37138982-37138983(+) m6A CDS       24284625 chr6:37141970-37141971(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr6:37141988-37141989(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr6:37142129-37142130(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr6:37142171-37142172(+) m6A 3'UTR       24284625//25456834//24981863 chr6:37142184-37142185(+) m6A 3'UTR       24284625//25456834//24981863 chr6:37142241-37142242(+) m6A 3'UTR       25456834//24981863 chr6:37142261-37142262(+) m6A 3'UTR       25456834 chr6:37142322-37142323(+) m6A 3'UTR       24284625 chr6:37142351-37142352(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PIM1	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART4-5p
Interactor2: PIM1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg