Basic Information:

  VIRBase ID:  

VHID00304223

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART3-3p:  MIMAT0003411          PLD6:  NM_178836     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART3-3p	PLD6
miRBase Accession/Entrez ID	MIMAT0003411	201164
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZUC

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLD6	chr17:17105038(-) A-I      3'UTR chr17:17105050(-) A-I      3'UTR chr17:17105090(-) A-I      3'UTR chr17:17105022(-) A-I      3'UTR chr17:17105200(-) A-I      3'UTR chr17:17105091(-) A-I      3'UTR chr17:17105216(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLD6	chr17:17105811-17105812(-) m6A 3'UTR       24284625//27773535//22575960//22608085 chr17:17105905-17105906(-) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr17:17105964-17105965(-) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr17:17105997-17105998(-) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr17:17106024-17106025(-) m6A 3'UTR       24284625//24981863//27773535//27371828//22575960//22608085 chr17:17106085-17106086(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr17:17106112-17106113(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr17:17106218-17106219(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr17:17106297-17106298(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr17:17106316-17106317(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr17:17106351-17106352(-) m6A CDS       24284625//27773535//22608085 chr17:17106387-17106388(-) m6A CDS       24284625//27773535//22608085 chr17:17107720-17107721(-) m6A intron       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLD6	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART3-3p
Interactor2: PLD6

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid
Support Database	RepTar//VmiReg