Basic Information:

  VIRBase ID:  

VHID00304173

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART3-3p:  MIMAT0003411          SPTSSB:  NM_001040100     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART3-3p	SPTSSB
miRBase Accession/Entrez ID	MIMAT0003411	165679
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADMP//C3orf57//SSSPTB

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SPTSSB	chr3:161065111(-) A-I      intronic chr3:161065644(-) A-I      intronic chr3:161065087(-) A-I      intronic chr3:161065991(-) A-I      intronic chr3:161065497(-) A-I      intronic chr3:161075918(-) A-I      intronic chr3:161065579(-) A-I      intronic chr3:161065128(-) A-I      intronic chr3:161065317(-) A-I      intronic chr3:161065626(-) A-I      intronic chr3:161065625(-) A-I      intronic chr3:161065631(-) A-I      intronic chr3:161065100(-) A-I      intronic chr3:161065339(-) A-I      intronic chr3:161074764(-) A-I      intronic chr3:161065661(-) A-I      intronic chr3:161065456(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SPTSSB	chr3:161077598-161077599(-) m6A 5'UTR//exon       27773535 chr3:161077604-161077605(-) m6A 5'UTR//exon       27773535 chr3:161077609-161077610(-) m6A 5'UTR//exon       27773535 chr3:161077653-161077654(-) m6A 5'UTR//exon       27773535 chr3:161077673-161077674(-) m6A 5'UTR//exon       27773535 chr3:161089338-161089339(-) m6A 3'UTR//5'UTR       27773535 chr3:161089440-161089441(-) m6A 3'UTR//5'UTR       25456834//27773535 chr3:161089519-161089520(-) m6A 3'UTR//5'UTR       25456834//24981863//28052920//27773535 chr3:161089549-161089550(-) m6A 3'UTR//5'UTR       25456834//24981863//28052920//27773535 chr3:161089568-161089569(-) m6A 3'UTR//5'UTR       25456834//24981863//28052920//27773535 chr3:161089614-161089615(-) m6A 3'UTR//5'UTR       25456834//28052920//27773535 chr3:161089635-161089636(-) m6A 3'UTR//5'UTR       25456834//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SPTSSB	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART3-3p
Interactor2: SPTSSB

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg