Detail Information

Basic Information:


  VIRBase ID:  

VHID00302208

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART3-3p:           DLG5:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART3-3p DLG5
miRBase
Accession/Entrez ID		 MIMAT0003411 9231
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - LP-DLG//P-DLG5//PDLG

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DLG5
chr10:79575306(-) A-I      intronic
chr10:79575342(-) A-I      intronic
chr10:79566150(-) A-I      intronic
chr10:79575372(-) A-I      intronic
chr10:79575383(-) A-I      intronic
chr10:79607567(-) A-I      intronic
chr10:79607716(-) A-I      intronic
chr10:79607646(-) A-I      intronic
chr10:79607664(-) A-I      intronic
chr10:79607683(-) A-I      intronic
chr10:79607692(-) A-I      intronic
chr10:79655154(-) A-I      intronic
chr10:79607720(-) A-I      intronic
chr10:79607759(-) A-I      intronic
chr10:79670692(-) A-I      intronic
chr10:79655177(-) A-I      intronic
chr10:79655180(-) A-I      intronic
chr10:79586265(-) A-I      intronic
chr10:79671137(-) A-I      intronic
chr10:79671152(-) A-I      intronic
chr10:79655155(-) A-I      intronic
chr10:79568248(-) A-I      intronic
chr10:79573873(-) A-I      intronic
chr10:79575252(-) A-I      intronic
chr10:79575296(-) A-I      intronic
chr10:79655119(-) A-I      intronic
chr10:79666651(-) A-I      intronic
chr10:79631573(-) A-I      intronic
chr10:79643545(-) A-I      intronic
chr10:79643522(-) A-I      intronic
chr10:79631368(-) A-I      intronic
chr10:79631501(-) A-I      intronic
chr10:79568998(-) A-I      intronic
chr10:79643517(-) A-I      intronic
chr10:79636052(-) A-I      intronic
chr10:79666602(-) A-I      intronic
chr10:79568256(-) A-I      intronic
chr10:79586584(-) A-I      intronic
chr10:79631343(-) A-I      intronic
chr10:79588188(-) A-I      intronic
chr10:79568906(-) A-I      intronic
chr10:79587177(-) A-I      intronic
chr10:79568650(-) A-I      intronic
chr10:79574009(-) A-I      intronic
chr10:79670473(-) A-I      intronic
chr10:79557882(-) A-I      intronic
chr10:79583555(-) A-I      intronic
chr10:79587112(-) A-I      intronic
chr10:79606369(-) A-I      intronic
chr10:79557947(-) A-I      intronic
chr10:79587051(-) A-I      intronic
chr10:79586201(-) A-I      intronic
chr10:79586623(-) A-I      intronic
chr10:79563817(-) A-I      intronic
chr10:79586373(-) A-I      intronic
chr10:79587036(-) A-I      intronic
chr10:79586616(-) A-I      intronic
chr10:79568735(-) A-I      intronic
chr10:79670699(-) A-I      intronic
chr10:79666494(-) A-I      intronic
chr10:79568117(-) A-I      intronic
chr10:79663134(-) A-I      intronic
chr10:79582159(-) A-I      intronic
chr10:79666583(-) A-I      intronic
chr10:79586568(-) A-I      intronic
chr10:79586562(-) A-I      intronic
chr10:79564888(-) A-I      intronic
chr10:79611909(-) A-I      intronic
chr10:79557740(-) A-I      intronic
chr10:79569120(-) A-I      intronic
chr10:79683514(-) A-I      intronic
chr10:79574599(-) A-I      intronic
chr10:79574593(-) A-I      intronic
chr10:79557741(-) A-I      intronic
chr10:79574579(-) A-I      intronic
chr10:79612441(-) A-I      intronic
chr10:79573904(-) A-I      intronic
chr10:79586557(-) A-I      intronic
chr10:79575196(-) A-I      intronic
chr10:79568110(-) A-I      intronic
chr10:79573743(-) A-I      intronic
chr10:79568127(-) A-I      intronic
chr10:79612415(-) A-I      intronic
chr10:79573741(-) A-I      intronic
chr10:79557760(-) A-I      intronic
chr10:79586379(-) A-I      intronic
chr10:79671168(-) A-I      intronic
chr10:79586489(-) A-I      intronic
chr10:79557774(-) A-I      intronic
chr10:79620304(-) A-I      intronic
chr10:79583461(-) A-I      intronic
chr10:79583456(-) A-I      intronic
chr10:79607593(-) A-I      intronic
chr10:79587166(-) A-I      intronic
chr10:79587161(-) A-I      intronic
chr10:79588061(-) A-I      intronic
chr10:79675896(-) A-I      intronic
chr10:79586259(-) A-I      intronic
chr10:79573900(-) A-I      intronic
chr10:79666496(-) A-I      intronic
chr10:79568636(-) A-I      intronic
chr10:79588078(-) A-I      intronic
chr10:79611901(-) A-I      intronic
chr10:79683502(-) A-I      intronic
chr10:79586275(-) A-I      intronic
chr10:79683472(-) A-I      intronic
chr10:79683469(-) A-I      intronic
chr10:79683388(-) A-I      intronic
chr10:79683351(-) A-I      intronic
chr10:79677005(-) A-I      intronic
chr10:79676245(-) A-I      intronic
chr10:79675003(-) A-I      intronic
chr10:79587148(-) A-I      intronic
chr10:79675002(-) A-I      intronic
chr10:79670983(-) A-I      intronic
chr10:79587121(-) A-I      intronic
chr10:79670621(-) A-I      intronic
chr10:79670572(-) A-I      intronic
chr10:79667285(-) A-I      intronic
chr10:79683272(-) A-I      intronic
chr10:79667120(-) A-I      intronic
chr10:79667092(-) A-I      intronic
chr10:79595574(-) A-I      NonSyn:Glu->Gly
chr10:79585442(-) A-I      intronic
chr10:79664958(-) A-I      intronic
chr10:79666451(-) A-I      intronic
chr10:79586670(-) A-I      intronic
chr10:79568281(-) A-I      intronic
chr10:79676230(-) A-I      intronic
chr10:79675856(-) A-I      intronic
chr10:79636040(-) A-I      intronic
chr10:79618683(-) A-I      intronic
chr10:79559505(-) A-I      intronic
chr10:79667093(-) A-I      intronic
chr10:79568103(-) A-I      intronic
chr10:79640046(-) A-I      intronic
chr10:79586649(-) A-I      intronic
chr10:79618833(-) A-I      intronic
chr10:79678148(-) A-I      intronic
chr10:79612862(-) A-I      intronic
chr10:79670647(-) A-I      intronic
chr10:79574022(-) A-I      intronic
chr10:79586219(-) A-I      intronic
chr10:79574405(-) A-I      intronic
chr10:79671712(-) A-I      intronic
chr10:79671146(-) A-I      intronic
chr10:79676282(-) A-I      intronic
chr10:79676187(-) A-I      intronic
chr10:79586620(-) A-I      intronic
chr10:79640803(-) A-I      intronic
chr10:79675895(-) A-I      intronic
chr10:79586130(-) A-I      intronic
chr10:79683656(-) A-I      intronic
chr10:79667085(-) A-I      intronic
chr10:79569064(-) A-I      intronic
chr10:79618360(-) A-I      intronic
chr10:79585514(-) A-I      intronic
chr10:79683711(-) A-I      intronic
chr10:79674830(-) A-I      intronic
chr10:79606368(-) A-I      intronic
chr10:79640949(-) A-I      intronic
chr10:79612879(-) A-I      intronic
chr10:79586705(-) A-I      intronic
chr10:79650331(-) A-I      intronic
chr10:79588081(-) A-I      intronic
chr10:79667207(-) A-I      intronic
chr10:79676186(-) A-I      intronic
chr10:79579882(-) A-I      intronic
chr10:79588145(-) A-I      intronic
chr10:79574565(-) A-I      intronic
chr10:79574551(-) A-I      intronic
chr10:79568254(-) A-I      intronic
chr10:79618755(-) A-I      intronic
chr10:79586619(-) A-I      intronic
chr10:79568302(-) A-I      intronic
chr10:79585513(-) A-I      intronic
chr10:79666531(-) A-I      intronic
chr10:79675790(-) A-I      intronic
chr10:79618362(-) A-I      intronic
chr10:79586239(-) A-I      intronic
chr10:79683407(-) A-I      intronic
chr10:79676252(-) A-I      intronic
chr10:79671791(-) A-I      intronic
chr10:79612873(-) A-I      intronic
chr10:79612029(-) A-I      intronic
chr10:79665052(-) A-I      intronic
chr10:79671159(-) A-I      intronic
chr10:79674985(-) A-I      intronic
chr10:79607554(-) A-I      intronic
chr10:79650318(-) A-I      intronic
chr10:79670581(-) A-I      intronic
chr10:79670546(-) A-I      intronic
chr10:79585494(-) A-I      intronic
chr10:79670526(-) A-I      intronic
chr10:79667311(-) A-I      intronic
chr10:79562495(-) A-I      intronic
chr10:79666663(-) A-I      intronic
chr10:79666450(-) A-I      intronic
chr10:79573772(-) A-I      intronic
chr10:79673606(-) A-I      intronic
chr10:79568229(-) A-I      intronic
chr10:79683665(-) A-I      intronic
chr10:79586222(-) A-I      intronic
chr10:79585485(-) A-I      intronic
chr10:79568289(-) A-I      intronic
chr10:79568249(-) A-I      intronic
chr10:79569101(-) A-I      intronic
chr10:79672279(-) A-I      intronic
chr10:79655756(-) A-I      intronic
chr10:79664986(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DLG5
chr10:79595574(-) A-I exon CDS    19478186

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DLG5
chr10:79550586-79550587(-) m6A 3'UTR//exon       27773535
chr10:79550631-79550632(-) m6A 3'UTR//exon       27773535
chr10:79550650-79550651(-) m6A 3'UTR//exon       27773535
chr10:79550674-79550675(-) m6A 3'UTR//exon       27773535
chr10:79550720-79550721(-) m6A 3'UTR//exon       27773535
chr10:79550746-79550747(-) m6A 3'UTR//exon       27773535
chr10:79550753-79550754(-) m6A 3'UTR//exon       27773535
chr10:79551467-79551468(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22608085
chr10:79551512-79551513(-) Y 3'UTR//exon       26075521
chr10:79551541-79551542(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79551600-79551601(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79551618-79551619(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79551676-79551677(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr10:79551692-79551693(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr10:79551737-79551738(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr10:79551897-79551898(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr10:79551968-79551969(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr10:79552046-79552047(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr10:79552069-79552070(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr10:79552075-79552076(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79552097-79552098(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79552145-79552146(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79552152-79552153(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79552236-79552237(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//22608085
chr10:79553306-79553307(-) m6A exon//intron       24284625//24209618
chr10:79553313-79553314(-) m6A exon//intron       24284625//24209618
chr10:79553335-79553336(-) m6A exon//intron       24284625
chr10:79553845-79553846(-) m6A CDS//exon       24284625//27773535//22575960
chr10:79553863-79553864(-) m6A CDS//exon       24284625//27773535//22575960
chr10:79554696-79554697(-) m6A CDS//exon       24284625//27773535
chr10:79565613-79565614(-) m6A 3'UTR//CDS//exon       27773535
chr10:79567674-79567675(-) m6A 3'UTR//CDS//exon       24284625
chr10:79567679-79567680(-) m6A 3'UTR//CDS//exon       24284625
chr10:79569317-79569318(-) m6A 3'UTR//CDS//exon       24284625
chr10:79569392-79569393(-) m6A 3'UTR//CDS//exon       24284625
chr10:79569462-79569463(-) m6A 3'UTR//CDS//exon       24284625
chr10:79570980-79570981(-) m6A 3'UTR//CDS//exon       24284625
chr10:79571801-79571802(-) m6A 3'UTR//CDS//exon       24284625
chr10:79576375-79576376(-) m6A 3'UTR//CDS//exon       27773535
chr10:79576410-79576411(-) m6A 3'UTR//CDS//exon       27773535
chr10:79577603-79577604(-) m6A 3'UTR//CDS//exon       24284625
chr10:79577617-79577618(-) m6A 3'UTR//CDS//exon       24284625
chr10:79579168-79579169(-) m6A 3'UTR//CDS//exon       24284625
chr10:79579746-79579747(-) m6A 3'UTR//CDS//exon       24284625
chr10:79579773-79579774(-) m6A 3'UTR//CDS//exon       24284625
chr10:79579799-79579800(-) m6A exon//intron       24284625
chr10:79580951-79580952(-) m6A 3'UTR//CDS//exon//intron       24284625
chr10:79580990-79580991(-) m6A 3'UTR//CDS//exon//intron       24284625
chr10:79581074-79581075(-) m6A 3'UTR//CDS//exon//intron       24284625//27773535
chr10:79581153-79581154(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//27773535//27371828
chr10:79581199-79581200(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//24981863//26404942//27773535//27371828
chr10:79581275-79581276(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79581291-79581292(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:79581405-79581406(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr10:79581431-79581432(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr10:79581440-79581441(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr10:79581480-79581481(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr10:79581536-79581537(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr10:79581616-79581617(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr10:79581680-79581681(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr10:79581683-79581684(-) Am 3'UTR//CDS//exon//intron       -
chr10:79581692-79581693(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr10:79581711-79581712(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr10:79581740-79581741(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr10:79581803-79581804(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr10:79581824-79581825(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr10:79584166-79584167(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22608085
chr10:79584214-79584215(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535
chr10:79584466-79584467(-) m6A exon//intron       24284625
chr10:79588652-79588653(-) m6A 3'UTR//CDS//exon       24284625//24209618
chr10:79589119-79589120(-) m6A 3'UTR//CDS//exon       24284625//24209618//27773535//27773536
chr10:79589237-79589238(-) m6A 3'UTR//CDS//exon       24209618//27773535//27371828//27773536
chr10:79589252-79589253(-) m6A 3'UTR//CDS//exon       24209618//24981863//27773535
chr10:79590004-79590005(-) m6A 3'UTR//CDS//exon       24284625//24209618//27773535//22575960
chr10:79590031-79590032(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960
chr10:79590627-79590628(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//22575960
chr10:79593764-79593765(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535//22575960
chr10:79595525-79595526(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535//22575960
chr10:79595546-79595547(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535//22575960
chr10:79595632-79595633(-) Y 3'UTR//CDS//intron       26075521
chr10:79595672-79595673(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr10:79601640-79601641(-) Cm 3'UTR//CDS//intron       -
chr10:79601724-79601725(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr10:79601735-79601736(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr10:79601835-79601836(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr10:79601850-79601851(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr10:79601900-79601901(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr10:79601906-79601907(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr10:79601924-79601925(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr10:79603249-79603250(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27371828//27773536
chr10:79603274-79603275(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27371828//27773536
chr10:79603294-79603295(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27371828//27773536
chr10:79603327-79603328(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//27773536
chr10:79603381-79603382(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535//27773536
chr10:79603405-79603406(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535//27773536
chr10:79603425-79603426(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535//27371828//27773536
chr10:79605013-79605014(-) m6A 3'UTR//intron       24284625//24209618
chr10:79613143-79613144(-) Gm CDS//intron       -
chr10:79613151-79613152(-) m6A CDS//intron       24284625//24209618//27773536
chr10:79613175-79613176(-) m6A CDS//intron       24284625//24209618//27773535//27773536//22575960
chr10:79613199-79613200(-) m6A CDS//intron       24284625//24209618//27773535//27773536//22575960
chr10:79613241-79613242(-) m6A CDS//intron       24284625//24209618//27773535//27773536//22575960
chr10:79613263-79613264(-) m6A CDS//intron       24284625//27773535//27773536//22575960
chr10:79613997-79613998(-) m6A CDS//intron       24284625//27773536//22575960
chr10:79614044-79614045(-) m6A CDS//intron       24284625//22575960
chr10:79614062-79614063(-) m6A CDS//intron       24284625
chr10:79616580-79616581(-) m6A CDS//intron       24284625//24981863//27773536
chr10:79628862-79628863(-) m6A exon//intron       24284625//27773536
chr10:79628918-79628919(-) m6A CDS//exon       24284625//27773536
chr10:79649207-79649208(-) m6A CDS//intron       24284625
chr10:79649235-79649236(-) m6A CDS//intron       24284625
chr10:79649248-79649249(-) m6A CDS//intron       24284625
chr10:79686069-79686070(-) m6A CDS       27773536
chr10:79686081-79686082(-) m6A CDS       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DLG5
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART3-3p
Interactor2: DLG5

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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