Detail Information

Basic Information:


  VIRBase ID:  

VHID00302076

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART3-3p:           PSCA:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART3-3p PSCA
miRBase
Accession/Entrez ID
MIMAT0003411 8000
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - PRO232

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PSCA
chr8:143763262-143763263(+) m6A exon//intron       24284625
chr8:143763937-143763938(+) m6A 3'UTR       22575960
chr8:143763979-143763980(+) m6A 3'UTR       22575960
chr8:143763989-143763990(+) m6A 3'UTR       22575960
chr8:143763997-143763998(+) m6A 3'UTR       22575960
chr8:143764124-143764125(+) m6A 3'UTR       22575960

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PSCA
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART3-3p
Interactor2: PSCA

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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