Basic Information:
VIRBase ID: VHID00301709
Virus: Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)
Host: Homo sapiens
Confidence Score: 0.9797
Interaction Type: Virus-Host interaction
Predicted Binding:
* It may take a few minutes to display results.
Interactor Information:
Interactor1
Interactor2
Symbol
ebv-miR-BART3-3p
NFKB1
miRBase Accession/Entrez ID
MIMAT0003411
4790
Organism
Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)
Homo sapiens
Category
miRNA
mRNA
Alias
-
CVID12//EBP-1//KBF1//NF-kappa-B1//NF-kappaB//NF-kappabeta//NF-kB//NF-kB1//NFkappaB//NFKB-p105//NFKB-p50
RNA Editing:
Resource
Symbol
Editing Position
Change
Genetic Region
RADAR
NFKB1
Resource
Symbol
Editing Position
Change
SeqReg
exReg
PMID
DARNED
NFKB1
RNA Modification:
Resource
Symbol
ModificationPosition
Type
Genomic Context
PMID
RMBase
NFKB1
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
NFKB1
Interaction Network (The top 100 interactions) :
Interactor1: ebv-miR-BART3-3p
Interactor2: NFKB1
Evidence Support:
Strong-Evidence
Dual luciferase reporter assay//qRT-PCR//Western blot
Weak-Evidence
RIP-seq//Small RNA sequencing
Support Database
ViRBase
References:
PMID
24257599
Target region
None
Source
ViRBase
Interactor1 expression
None
Tissue or cell line
293T cells//Akata-LCLd3 cells//IBL1-LCLd3 cells
Interactor2 expression
Downregulation
Description
These data demonstrate that miR-rL1-8 can functionally substitute for miR-BART5 and that miR-BART5 and miR-BART16 negatively regulate NF-kappaB signaling by directly targeting the LMP1 3'UTR.