Basic Information:

  VIRBase ID:  

VHID00301171

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART3-3p:  MIMAT0003411          ACAA1:  NR_024024     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART3-3p	ACAA1
miRBase Accession/Entrez ID	MIMAT0003411	30
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACAA//PTHIO//THIO

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ACAA1	chr3:38177612(-) A-I      intronic chr3:38177611(-) A-I      intronic chr3:38177596(-) A-I      intronic chr3:38176153(-) A-I      intronic chr3:38176152(-) A-I      intronic chr3:38176220(-) A-I      intronic chr3:38176125(-) A-I      intronic chr3:38176069(-) A-I      intronic chr3:38176093(-) A-I      intronic chr3:38176094(-) A-I      intronic chr3:38176130(-) A-I      intronic chr3:38176154(-) A-I      intronic chr3:38176175(-) A-I      intronic chr3:38176123(-) A-I      intronic chr3:38176332(-) A-I      intronic chr3:38176337(-) A-I      intronic chr3:38176885(-) A-I      intronic chr3:38176912(-) A-I      intronic chr3:38177486(-) A-I      intronic chr3:38177538(-) A-I      intronic chr3:38177661(-) A-I      intronic chr3:38177668(-) A-I      intronic chr3:38177655(-) A-I      intronic chr3:38177631(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ACAA1	chr3:38163798-38163799(-) m6A exon       24981863//22608085 chr3:38163834-38163835(-) m6A exon       24981863//27773535//22608085 chr3:38164332-38164333(-) m6A 3'UTR//exon//intron       24209618//24981863//28052920//27773535//22608085 chr3:38164382-38164383(-) m6A 3'UTR//exon//intron       24209618//24981863//27773535//22608085 chr3:38164419-38164420(-) m6A 3'UTR//exon       24209618//24981863//27773535//27371828//22608085 chr3:38164446-38164447(-) m6A 3'UTR//exon       24209618//24981863//27773535//27371828//22608085 chr3:38164459-38164460(-) m6A 3'UTR//exon       24209618//24981863//27773535//27371828//22608085 chr3:38164506-38164507(-) m6A 3'UTR//exon       24209618//24981863//27773535//27371828 chr3:38164541-38164542(-) m6A 3'UTR//CDS//exon       24209618//24981863//27773535//27371828 chr3:38164581-38164582(-) m6A 3'UTR//CDS//exon       24209618//27773535 chr3:38167350-38167351(-) m6A 3'UTR//CDS//exon       27773535 chr3:38167466-38167467(-) m6A exon//intron       27773535 chr3:38168040-38168041(-) m6A 3'UTR//CDS//exon       27773535//27371828 chr3:38176677-38176678(-) m6A exon//intron       27773535 chr3:38176711-38176712(-) m6A exon//intron       - chr3:38178093-38178094(-) m6A CDS//exon       27773536 chr3:38178104-38178105(-) m6A CDS//exon       27773536 chr3:38178558-38178559(-) m6A 5'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ACAA1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART3-3p
Interactor2: ACAA1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg