Basic Information:

  VIRBase ID:  

VHID00299686

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART3-5p:  MIMAT0003410          MARK1:  NM_001286129     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART3-5p	MARK1
miRBase Accession/Entrez ID	MIMAT0003410	4139
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MARK//Par-1c//Par1c

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MARK1	chr1:220822629(+) A-I      intronic chr1:220799070(+) A-I      intronic chr1:220799075(+) A-I      intronic chr1:220799085(+) A-I      intronic chr1:220799093(+) A-I      intronic chr1:220799147(+) A-I      intronic chr1:220799152(+) A-I      intronic chr1:220799154(+) A-I      intronic chr1:220799161(+) A-I      intronic chr1:220799182(+) A-I      intronic chr1:220822635(+) A-I      intronic chr1:220822633(+) A-I      intronic chr1:220822630(+) A-I      intronic chr1:220779442(+) A-I      intronic chr1:220721107(+) A-I      intronic chr1:220772170(+) A-I      intronic chr1:220787585(+) A-I      intronic chr1:220822616(+) A-I      intronic chr1:220721093(+) A-I      intronic chr1:220822655(+) A-I      intronic chr1:220810233(+) A-I      intronic chr1:220723931(+) A-I      intronic chr1:220810942(+) A-I      intronic chr1:220822686(+) A-I      intronic chr1:220812475(+) A-I      intronic chr1:220720264(+) A-I      intronic chr1:220710089(+) A-I      intronic chr1:220822833(+) A-I      intronic chr1:220810846(+) A-I      intronic chr1:220810151(+) A-I      intronic chr1:220810844(+) A-I      intronic chr1:220814628(+) A-I      intronic chr1:220722048(+) A-I      intronic chr1:220813920(+) A-I      intronic chr1:220710104(+) A-I      intronic chr1:220704940(+) A-I      intronic chr1:220792695(+) A-I      intronic chr1:220772178(+) A-I      intronic chr1:220759108(+) A-I      intronic chr1:220770520(+) A-I      intronic chr1:220822832(+) A-I      intronic chr1:220792578(+) A-I      intronic chr1:220822681(+) A-I      intronic chr1:220810195(+) A-I      intronic chr1:220813980(+) A-I      intronic chr1:220812404(+) A-I      intronic chr1:220822726(+) A-I      intronic chr1:220822673(+) A-I      intronic chr1:220721170(+) A-I      intronic chr1:220822735(+) A-I      intronic chr1:220822807(+) A-I      intronic chr1:220812500(+) A-I      intronic chr1:220822799(+) A-I      intronic chr1:220822621(+) A-I      intronic chr1:220822839(+) A-I      intronic chr1:220822708(+) A-I      intronic chr1:220770581(+) A-I      intronic chr1:220723878(+) A-I      intronic chr1:220822698(+) A-I      intronic chr1:220812460(+) A-I      intronic chr1:220810900(+) A-I      intronic chr1:220810901(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MARK1	chr1:220752802-220752803(+) m6A CDS//exon       24981863 chr1:220752836-220752837(+) m6A CDS//exon       24981863 chr1:220756070-220756071(+) Y intron       26075521 chr1:220799371-220799372(+) m6A intron       22608085 chr1:220799444-220799445(+) m6A intron       22608085 chr1:220799464-220799465(+) m6A intron       22608085 chr1:220799494-220799495(+) m6A intron       22608085 chr1:220799561-220799562(+) m6A intron       24284625//22608085 chr1:220799647-220799648(+) m6A intron       24284625//22608085 chr1:220799686-220799687(+) m6A intron       24284625//22608085 chr1:220799697-220799698(+) m6A intron       24284625//22608085 chr1:220800640-220800641(+) m6A intron       - chr1:220800675-220800676(+) m6A intron       - chr1:220831162-220831163(+) m6A CDS//intron       22608085 chr1:220835168-220835169(+) m6A CDS       24981863//22608085 chr1:220835182-220835183(+) m6A CDS       24209618//24981863//22608085 chr1:220835241-220835242(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:220835257-220835258(+) m6A CDS       24284625//24209618//24981863//22608085 chr1:220835363-220835364(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr1:220835451-220835452(+) m6A CDS       24284625//24981863//22608085 chr1:220835470-220835471(+) m6A CDS       24284625//24981863//22608085 chr1:220836396-220836397(+) m6A 3'UTR       24284625//22608085 chr1:220836413-220836414(+) m6A 3'UTR       24284625//22608085 chr1:220836486-220836487(+) m6A 3'UTR       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MARK1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART3-5p
Interactor2: MARK1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg