Basic Information:

  VIRBase ID:  

VHID00298468

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART1-3p:  MIMAT0003390          CHIC2:  NM_012110     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART1-3p	CHIC2
miRBase Accession/Entrez ID	MIMAT0003390	26511
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BTL

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CHIC2	chr4:54914327(-) A-I      intronic chr4:54907250(-) A-I      intronic chr4:54907199(-) A-I      intronic chr4:54907222(-) A-I      intronic chr4:54907247(-) A-I      intronic chr4:54914350(-) A-I      intronic chr4:54914332(-) A-I      intronic chr4:54914330(-) A-I      intronic chr4:54898032(-) A-I      intronic chr4:54876922(-) A-I      intronic chr4:54899218(-) A-I      intronic chr4:54909332(-) A-I      intronic chr4:54909221(-) A-I      intronic chr4:54907277(-) A-I      intronic chr4:54914293(-) A-I      intronic chr4:54914353(-) A-I      intronic chr4:54914446(-) A-I      intronic chr4:54920020(-) A-I      intronic chr4:54920023(-) A-I      intronic chr4:54896558(-) A-I      intronic chr4:54896607(-) A-I      intronic chr4:54899271(-) A-I      intronic chr4:54896628(-) A-I      intronic chr4:54896652(-) A-I      intronic chr4:54897158(-) A-I      intronic chr4:54897184(-) A-I      intronic chr4:54920152(-) A-I      intronic chr4:54920151(-) A-I      intronic chr4:54920078(-) A-I      intronic chr4:54920063(-) A-I      intronic chr4:54897879(-) A-I      intronic chr4:54897884(-) A-I      intronic chr4:54920043(-) A-I      intronic chr4:54920036(-) A-I      intronic chr4:54897898(-) A-I      intronic chr4:54897911(-) A-I      intronic chr4:54906702(-) A-I      intronic chr4:54906705(-) A-I      intronic chr4:54906719(-) A-I      intronic chr4:54906923(-) A-I      intronic chr4:54906962(-) A-I      intronic chr4:54909550(-) A-I      intronic chr4:54914326(-) A-I      intronic chr4:54907189(-) A-I      intronic chr4:54914232(-) A-I      intronic chr4:54907251(-) A-I      intronic chr4:54909407(-) A-I      intronic chr4:54906746(-) A-I      intronic chr4:54907271(-) A-I      intronic chr4:54906959(-) A-I      intronic chr4:54914423(-) A-I      intronic chr4:54907212(-) A-I      intronic chr4:54906945(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CHIC2	chr4:54930590-54930591(-) m6A 5'UTR       27773536 chr4:54930604-54930605(-) m6A 5'UTR       27773536 chr4:54930633-54930634(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CHIC2	Exosome Blood     - Membrane K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART1-3p
Interactor2: CHIC2

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg