Basic Information:

  VIRBase ID:  

VHID00295540

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-5p:  MIMAT0001000          ZMIZ1:  NM_020338     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART2-5p	ZMIZ1
miRBase Accession/Entrez ID	MIMAT0001000	57178
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MIZ//NEDDFSA//RAI17//TRAFIP10//ZIMP10

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZMIZ1	chr10:81033193(+) A-I      intronic chr10:80870147(+) A-I      intronic chr10:80870171(+) A-I      intronic chr10:81039911(+) A-I      intronic chr10:80870167(+) A-I      intronic chr10:80870170(+) A-I      intronic chr10:80870181(+) A-I      intronic chr10:81040749(+) A-I      intronic chr10:81040118(+) A-I      intronic chr10:81039926(+) A-I      intronic chr10:81062745(+) A-I      intronic chr10:81062802(+) A-I      intronic chr10:81040010(+) A-I      intronic chr10:81031922(+) A-I      intronic chr10:81063046(+) A-I      intronic chr10:80972318(+) A-I      intronic chr10:81040093(+) A-I      intronic chr10:80854524(+) A-I      intronic chr10:81063064(+) A-I      intronic chr10:81039910(+) A-I      intronic chr10:81062699(+) A-I      intronic chr10:81062864(+) A-I      intronic chr10:80978147(+) A-I      intronic chr10:81063061(+) A-I      intronic chr10:81040306(+) A-I      intronic chr10:81063010(+) A-I      intronic chr10:80901400(+) A-I      intronic chr10:81063107(+) A-I      intronic chr10:81040106(+) A-I      intronic chr10:81062891(+) A-I      intronic chr10:80972384(+) A-I      intronic chr10:80854530(+) A-I      intronic chr10:81062967(+) A-I      intronic chr10:81031975(+) A-I      intronic chr10:81063175(+) A-I      intronic chr10:81062804(+) A-I      intronic chr10:80972366(+) A-I      intronic chr10:81033389(+) A-I      intronic chr10:81063053(+) A-I      intronic chr10:81033295(+) A-I      intronic chr10:81019643(+) A-I      intronic chr10:81063132(+) A-I      intronic chr10:81062736(+) A-I      intronic chr10:81063104(+) A-I      intronic chr10:81063052(+) A-I      intronic chr10:81040083(+) A-I      intronic chr10:81039964(+) A-I      intronic chr10:81039874(+) A-I      intronic chr10:81062968(+) A-I      intronic chr10:80991609(+) A-I      intronic chr10:80978011(+) A-I      intronic chr10:81040055(+) A-I      intronic chr10:81031865(+) A-I      intronic chr10:80972410(+) A-I      intronic chr10:81062760(+) A-I      intronic chr10:81033329(+) A-I      intronic chr10:80958697(+) A-I      intronic chr10:81039929(+) A-I      intronic chr10:81062824(+) A-I      intronic chr10:80840246(+) A-I      intronic chr10:80972393(+) A-I      intronic chr10:81063060(+) A-I      intronic chr10:80854541(+) A-I      intronic chr10:80972419(+) A-I      intronic chr10:81063013(+) A-I      intronic chr10:80870158(+) A-I      intronic chr10:80870586(+) A-I      intronic chr10:80962387(+) A-I      intronic chr10:80870585(+) A-I      intronic chr10:81033377(+) A-I      intronic chr10:81031812(+) A-I      intronic chr10:80870576(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZMIZ1	chr10:80899468-80899469(+) m6A 5'UTR       - chr10:80921864-80921865(+) m6A 5'UTR       - chr10:80961345-80961346(+) m6A 5'UTR       - chr10:80961370-80961371(+) m6A 5'UTR       - chr10:80961402-80961403(+) m6A CDS       - chr10:80961419-80961420(+) m6A CDS       - chr10:81037022-81037023(+) m6A CDS//exon       - chr10:81050725-81050726(+) m6A CDS//exon//intron       24284625 chr10:81052080-81052081(+) m6A CDS//exon//intron       - chr10:81052087-81052088(+) m6A CDS//exon//intron       - chr10:81052099-81052100(+) m6A CDS//exon//intron       - chr10:81052109-81052110(+) m6A CDS//exon//intron       - chr10:81053174-81053175(+) m6A CDS//exon//intron       - chr10:81053219-81053220(+) m6A CDS//exon//intron       - chr10:81053282-81053283(+) m6A CDS//exon//intron       - chr10:81053344-81053345(+) m6A CDS//exon//intron       24981863 chr10:81053384-81053385(+) m6A CDS//exon//intron       - chr10:81053443-81053444(+) m6A exon//intron       24284625//24209618 chr10:81053449-81053450(+) m6A exon//intron       24284625//24209618 chr10:81053465-81053466(+) m6A exon//intron       24284625//24209618 chr10:81056240-81056241(+) m6A CDS//exon//intron       24284625//24981863 chr10:81056253-81056254(+) m6A CDS//exon//intron       24284625//24981863 chr10:81056258-81056259(+) m6A CDS//exon//intron       24284625//24981863 chr10:81056337-81056338(+) m6A CDS//exon//intron       24284625//24981863 chr10:81057386-81057387(+) m6A CDS//intron       - chr10:81058214-81058215(+) m6A CDS//intron       24981863 chr10:81058281-81058282(+) m6A CDS//intron       24981863 chr10:81065921-81065922(+) m6A CDS//intron       - chr10:81065971-81065972(+) m6A CDS//intron       - chr10:81067206-81067207(+) m6A CDS//intron       - chr10:81067217-81067218(+) m6A CDS//intron       - chr10:81067269-81067270(+) m6A CDS//intron       24284625//24209618 chr10:81067300-81067301(+) m6A CDS//intron       24284625//24209618//24981863 chr10:81067325-81067326(+) m6A CDS//intron       24284625//24209618//24981863 chr10:81072409-81072410(+) m6A CDS//intron       24284625//24209618//24981863 chr10:81072444-81072445(+) m6A CDS//intron       24284625//24209618//24981863 chr10:81072498-81072499(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr10:81072595-81072596(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960 chr10:81072660-81072661(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960 chr10:81072771-81072772(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960 chr10:81072789-81072790(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960 chr10:81072893-81072894(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:81073021-81073022(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:81073060-81073061(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:81073073-81073074(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:81073140-81073141(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:81073166-81073167(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:81073211-81073212(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:81073233-81073234(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:81073280-81073281(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:81073300-81073301(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:81073381-81073382(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:81073428-81073429(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:81073483-81073484(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr10:81073494-81073495(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:81073553-81073554(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960 chr10:81073564-81073565(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960 chr10:81073646-81073647(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960 chr10:81073732-81073733(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863 chr10:81073798-81073799(+) m6A 3'UTR//intron       24284625//24981863 chr10:81073860-81073861(+) m6A 3'UTR//CDS       24284625 chr10:81074412-81074413(+) m6A 3'UTR       24981863 chr10:81074426-81074427(+) m6A 3'UTR       24981863 chr10:81074448-81074449(+) m6A 3'UTR       24981863 chr10:81074454-81074455(+) m6A 3'UTR       24981863 chr10:81074497-81074498(+) m6A 3'UTR       24981863 chr10:81074529-81074530(+) m6A 3'UTR       24981863 chr10:81074576-81074577(+) m6A 3'UTR       24981863 chr10:81075000-81075001(+) m6A 3'UTR       24284625 chr10:81075102-81075103(+) m6A 3'UTR       24284625//24209618//24981863 chr10:81075115-81075116(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr10:81075131-81075132(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr10:81075280-81075281(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085 chr10:81075359-81075360(+) Y 3'UTR       26075521 chr10:81075395-81075396(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr10:81075604-81075605(+) m6A 3'UTR       24981863//22608085 chr10:81075609-81075610(+) m6A 3'UTR       24981863//22608085 chr10:81075614-81075615(+) m6A 3'UTR       24981863 chr10:81075633-81075634(+) m6A 3'UTR       24981863 chr10:81075651-81075652(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZMIZ1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART2-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 Dovitinib       135398510

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART2-5p
Interactor2: ZMIZ1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg