Detail Information

Basic Information:


  VIRBase ID:  

VHID00294798

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-5p:           COQ2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART2-5p COQ2
miRBase
Accession/Entrez ID		 MIMAT0001000 27235
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - CL640//COQ10D1//MSA1//PHB:PPT

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR COQ2
chr4:84187060(-) A-I      intronic
chr4:84186844(-) A-I      intronic
chr4:84187704(-) A-I      intronic
chr4:84186997(-) A-I      intronic
chr4:84187649(-) A-I      intronic
chr4:84186988(-) A-I      intronic
chr4:84185704(-) A-I      intronic
chr4:84185779(-) A-I      intronic
chr4:84186601(-) A-I      intronic
chr4:84186642(-) A-I      intronic
chr4:84186726(-) A-I      intronic
chr4:84186962(-) A-I      intronic
chr4:84187541(-) A-I      intronic
chr4:84186929(-) A-I      intronic
chr4:84186625(-) A-I      intronic
chr4:84186946(-) A-I      intronic
chr4:84186603(-) A-I      intronic
chr4:84186695(-) A-I      intronic
chr4:84187687(-) A-I      intronic
chr4:84185721(-) A-I      intronic
chr4:84187690(-) A-I      intronic
chr4:84187090(-) A-I      intronic
chr4:84185787(-) A-I      intronic
chr4:84186450(-) A-I      intronic
chr4:84186553(-) A-I      intronic
chr4:84185678(-) A-I      intronic
chr4:84185668(-) A-I      intronic
chr4:84187578(-) A-I      intronic
chr4:84195125(-) A-I      intronic
chr4:84187648(-) A-I      intronic
chr4:84188444(-) A-I      intronic
chr4:84186568(-) A-I      intronic
chr4:84186956(-) A-I      intronic
chr4:84186895(-) A-I      intronic
chr4:84188435(-) A-I      intronic
chr4:84187675(-) A-I      intronic
chr4:84186955(-) A-I      intronic
chr4:84186488(-) A-I      intronic
chr4:84186893(-) A-I      intronic
chr4:84186996(-) A-I      intronic
chr4:84186557(-) A-I      intronic
chr4:84186849(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED COQ2
chr4:84185399(-) A-I exon CDS    19478186
chr4:84186488(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase COQ2
chr4:84183778-84183779(-) m6A 3'UTR       27773535
chr4:84185014-84185015(-) m6A 3'UTR//intron       27773535
chr4:84185255-84185256(-) m6A 3'UTR//intron       27773535
chr4:84185321-84185322(-) m6A 3'UTR//intron       27773535
chr4:84185386-84185387(-) m6A 3'UTR//CDS//intron       27773535
chr4:84185395-84185396(-) m6A 3'UTR//CDS//intron       27773535
chr4:84185447-84185448(-) m6A 3'UTR//CDS//intron       27773535
chr4:84185455-84185456(-) m6A 3'UTR//CDS//intron       27773535
chr4:84185492-84185493(-) m6A 3'UTR//CDS//intron       27773535
chr4:84185502-84185503(-) m6A 3'UTR//CDS//intron       27773535
chr4:84187854-84187855(-) m6A 3'UTR//intron       27773535
chr4:84187896-84187897(-) m6A 3'UTR//intron       27773535
chr4:84205723-84205724(-) m6A CDS       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate COQ2
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART2-5p
Panobinostat       6918837
Irinotecan       60838
Topotecan       60700
Dovitinib       135398510

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART2-5p
Interactor2: COQ2

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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