Basic Information:

  VIRBase ID:  

VHID00292563

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-5p:  MIMAT0001000          GRIA2:  NM_001379001     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART2-5p	GRIA2
miRBase Accession/Entrez ID	MIMAT0001000	2891
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GluA2//gluR-2//gluR-B//GluR-K2//GLUR2//GLURB//HBGR2//NEDLIB

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GRIA2	chr4:158269443(+) A-I      intronic chr4:158269435(+) A-I      intronic chr4:158269665(+) A-I      intronic chr4:158269600(+) A-I      intronic chr4:158269174(+) A-I      intronic chr4:158152551(+) A-I      intronic chr4:158152550(+) A-I      intronic chr4:158152526(+) A-I      intronic chr4:158269556(+) A-I      intronic chr4:158169599(+) A-I      intronic chr4:158152371(+) A-I      intronic chr4:158149690(+) A-I      intronic chr4:158269045(+) A-I      intronic chr4:158269465(+) A-I      intronic chr4:158274149(+) A-I      intronic chr4:158152308(+) A-I      intronic chr4:158274773(+) A-I      intronic chr4:158201186(+) A-I      intronic chr4:158269520(+) A-I      intronic chr4:158149866(+) A-I      intronic chr4:158269471(+) A-I      intronic chr4:158152374(+) A-I      intronic chr4:158152332(+) A-I      intronic chr4:158170069(+) A-I      intronic chr4:158149854(+) A-I      intronic chr4:158269625(+) A-I      intronic chr4:158149783(+) A-I      intronic chr4:158152576(+) A-I      intronic chr4:158269247(+) A-I      intronic chr4:158169598(+) A-I      intronic chr4:158180283(+) A-I      intronic chr4:158170119(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GRIA2	chr4:158257875(+) A-I exon CDS    19478186 chr4:158257879(+) A-I exon CDS    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GRIA2	chr4:158284611-158284612(+) m6A 3'UTR//exon       24981863 chr4:158284760-158284761(+) m6A 3'UTR//exon       24981863//22575960 chr4:158284837-158284838(+) m6A 3'UTR//exon       24981863 chr4:158284907-158284908(+) m6A 3'UTR//exon       24981863 chr4:158284937-158284938(+) m6A 3'UTR//exon       24981863 chr4:158284951-158284952(+) m6A 3'UTR//exon       24981863 chr4:158285003-158285004(+) m6A 3'UTR//exon       24981863 chr4:158285010-158285011(+) m6A 3'UTR//exon       24981863 chr4:158285118-158285119(+) m6A 3'UTR//exon       24981863 chr4:158285127-158285128(+) m6A 3'UTR//exon       24981863 chr4:158285157-158285158(+) m6A 3'UTR//exon       24981863 chr4:158285203-158285204(+) m6A 3'UTR//exon       24981863 chr4:158285209-158285210(+) m6A 3'UTR//exon       24981863 chr4:158285217-158285218(+) m6A 3'UTR//exon       24981863 chr4:158285302-158285303(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GRIA2	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART2-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 Dovitinib       135398510

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART2-5p
Interactor2: GRIA2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg