Basic Information:

  VIRBase ID:  

VHID00292284

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-5p:  MIMAT0001000          CTSO:  NM_001334     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART2-5p	CTSO
miRBase Accession/Entrez ID	MIMAT0001000	1519
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CTSO1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CTSO	chr4:156859892(-) A-I      intronic chr4:156859986(-) A-I      intronic chr4:156858941(-) A-I      intronic chr4:156859844(-) A-I      intronic chr4:156858935(-) A-I      intronic chr4:156858995(-) A-I      intronic chr4:156859019(-) A-I      intronic chr4:156858971(-) A-I      intronic chr4:156858986(-) A-I      intronic chr4:156858839(-) A-I      intronic chr4:156858000(-) A-I      intronic chr4:156858832(-) A-I      intronic chr4:156859968(-) A-I      intronic chr4:156859040(-) A-I      intronic chr4:156859014(-) A-I      intronic chr4:156858859(-) A-I      intronic chr4:156859997(-) A-I      intronic chr4:156860052(-) A-I      intronic chr4:156860063(-) A-I      intronic chr4:156860073(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CTSO	chr4:156858905(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CTSO	chr4:156846083-156846084(-) m6A 3'UTR       27773535 chr4:156846150-156846151(-) m6A 3'UTR       27773535 chr4:156846994-156846995(-) m6A 3'UTR       24981863 chr4:156847012-156847013(-) m6A 3'UTR       24981863 chr4:156874928-156874929(-) m6A CDS       27371828//27773536 chr4:156875035-156875036(-) m6A 5'UTR       27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CTSO	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART2-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 Dovitinib       135398510

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART2-5p
Interactor2: CTSO

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg