Basic Information:

  VIRBase ID:  

VHID00292065

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-5p:  MIMAT0001000          ARCN1:  NM_001655     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART2-5p	ARCN1
miRBase Accession/Entrez ID	MIMAT0001000	372
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	COPD//SRMMD

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARCN1	chr11:118447704(+) A-I      intronic chr11:118466671(+) A-I      intronic chr11:118447787(+) A-I      intronic chr11:118464992(+) A-I      intronic chr11:118445900(+) A-I      intronic chr11:118447751(+) A-I      intronic chr11:118447750(+) A-I      intronic chr11:118447749(+) A-I      intronic chr11:118447723(+) A-I      intronic chr11:118447721(+) A-I      intronic chr11:118460239(+) A-I      intronic chr11:118464901(+) A-I      intronic chr11:118460224(+) A-I      intronic chr11:118464964(+) A-I      intronic chr11:118464967(+) A-I      intronic chr11:118454377(+) A-I      intronic chr11:118460343(+) A-I      intronic chr11:118455634(+) A-I      intronic chr11:118451666(+) A-I      intronic chr11:118457391(+) A-I      intronic chr11:118447741(+) A-I      intronic chr11:118459574(+) A-I      intronic chr11:118465035(+) A-I      intronic chr11:118455802(+) A-I      intronic chr11:118460944(+) A-I      intronic chr11:118447981(+) A-I      intronic chr11:118459665(+) A-I      intronic chr11:118448017(+) A-I      intronic chr11:118459618(+) A-I      intronic chr11:118465628(+) A-I      intronic chr11:118448692(+) A-I      intronic chr11:118459572(+) A-I      intronic chr11:118457420(+) A-I      intronic chr11:118465690(+) A-I      intronic chr11:118451476(+) A-I      intronic chr11:118455803(+) A-I      intronic chr11:118459602(+) A-I      intronic chr11:118448802(+) A-I      intronic chr11:118460810(+) A-I      intronic chr11:118457000(+) A-I      intronic chr11:118460970(+) A-I      intronic chr11:118466597(+) A-I      intronic chr11:118455912(+) A-I      intronic chr11:118466599(+) A-I      intronic chr11:118452767(+) A-I      intronic chr11:118445768(+) A-I      intronic chr11:118451473(+) A-I      intronic chr11:118466604(+) A-I      intronic chr11:118450804(+) A-I      intronic chr11:118455938(+) A-I      intronic chr11:118456911(+) A-I      intronic chr11:118456947(+) A-I      intronic chr11:118466605(+) A-I      intronic chr11:118456952(+) A-I      intronic chr11:118457045(+) A-I      intronic chr11:118457336(+) A-I      intronic chr11:118460396(+) A-I      intronic chr11:118452753(+) A-I      intronic chr11:118460335(+) A-I      intronic chr11:118450836(+) A-I      intronic chr11:118460398(+) A-I      intronic chr11:118460410(+) A-I      intronic chr11:118457456(+) A-I      intronic chr11:118451447(+) A-I      intronic chr11:118450214(+) A-I      intronic chr11:118460168(+) A-I      intronic chr11:118464844(+) A-I      intronic chr11:118451584(+) A-I      intronic chr11:118457275(+) A-I      intronic chr11:118452997(+) A-I      intronic chr11:118460847(+) A-I      intronic chr11:118447745(+) A-I      intronic chr11:118450839(+) A-I      intronic chr11:118453334(+) A-I      intronic chr11:118460890(+) A-I      intronic chr11:118457479(+) A-I      intronic chr11:118447827(+) A-I      intronic chr11:118465694(+) A-I      intronic chr11:118451477(+) A-I      intronic chr11:118456875(+) A-I      intronic chr11:118457372(+) A-I      intronic chr11:118459483(+) A-I      intronic chr11:118448756(+) A-I      intronic chr11:118457383(+) A-I      intronic chr11:118459484(+) A-I      intronic chr11:118460990(+) A-I      intronic chr11:118448638(+) A-I      intronic chr11:118459554(+) A-I      intronic chr11:118453239(+) A-I      intronic chr11:118451590(+) A-I      intronic chr11:118453185(+) A-I      intronic chr11:118453241(+) A-I      intronic chr11:118451592(+) A-I      intronic chr11:118459531(+) A-I      intronic chr11:118448136(+) A-I      intronic chr11:118448197(+) A-I      intronic chr11:118464954(+) A-I      intronic chr11:118460840(+) A-I      intronic chr11:118455793(+) A-I      intronic chr11:118456897(+) A-I      intronic chr11:118451421(+) A-I      intronic chr11:118464884(+) A-I      intronic chr11:118445794(+) A-I      intronic chr11:118448055(+) A-I      intronic chr11:118456994(+) A-I      intronic chr11:118456950(+) A-I      intronic chr11:118451014(+) A-I      intronic chr11:118447622(+) A-I      intronic chr11:118448061(+) A-I      intronic chr11:118455748(+) A-I      intronic chr11:118459653(+) A-I      intronic chr11:118448062(+) A-I      intronic chr11:118465809(+) A-I      intronic chr11:118450959(+) A-I      intronic chr11:118448711(+) A-I      intronic chr11:118448646(+) A-I      intronic chr11:118459622(+) A-I      intronic chr11:118447742(+) A-I      intronic chr11:118452999(+) A-I      intronic chr11:118459504(+) A-I      intronic chr11:118447701(+) A-I      intronic chr11:118467670(+) A-I      intronic chr11:118459729(+) A-I      intronic chr11:118460176(+) A-I      intronic chr11:118460734(+) A-I      intronic chr11:118465077(+) A-I      intronic chr11:118450215(+) A-I      intronic chr11:118448236(+) A-I      intronic chr11:118457335(+) A-I      intronic chr11:118448709(+) A-I      intronic chr11:118464879(+) A-I      intronic chr11:118453184(+) A-I      intronic chr11:118453319(+) A-I      intronic chr11:118467697(+) A-I      intronic chr11:118455726(+) A-I      intronic chr11:118459366(+) A-I      intronic chr11:118459713(+) A-I      intronic chr11:118447993(+) A-I      intronic chr11:118451579(+) A-I      intronic chr11:118453263(+) A-I      intronic chr11:118447737(+) A-I      intronic chr11:118465765(+) A-I      intronic chr11:118457460(+) A-I      intronic chr11:118465644(+) A-I      intronic chr11:118457351(+) A-I      intronic chr11:118445823(+) A-I      intronic chr11:118445763(+) A-I      intronic chr11:118459304(+) A-I      intronic chr11:118456915(+) A-I      intronic chr11:118457446(+) A-I      intronic chr11:118456991(+) A-I      intronic chr11:118467801(+) A-I      intronic chr11:118459613(+) A-I      intronic chr11:118448074(+) A-I      intronic chr11:118459718(+) A-I      intronic chr11:118465840(+) A-I      intronic chr11:118459364(+) A-I      intronic chr11:118457074(+) A-I      intronic chr11:118448623(+) A-I      intronic chr11:118450818(+) A-I      intronic chr11:118448594(+) A-I      intronic chr11:118460972(+) A-I      intronic chr11:118448100(+) A-I      intronic chr11:118456936(+) A-I      intronic chr11:118448042(+) A-I      intronic chr11:118452932(+) A-I      intronic chr11:118448715(+) A-I      intronic chr11:118456864(+) A-I      intronic chr11:118445755(+) A-I      intronic chr11:118467669(+) A-I      intronic chr11:118447645(+) A-I      intronic chr11:118464876(+) A-I      intronic chr11:118455815(+) A-I      intronic chr11:118447667(+) A-I      intronic chr11:118464944(+) A-I      intronic chr11:118457046(+) A-I      intronic chr11:118464989(+) A-I      intronic chr11:118445551(+) A-I      intronic chr11:118455875(+) A-I      intronic chr11:118460257(+) A-I      intronic chr11:118459568(+) A-I      intronic chr11:118457281(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ARCN1	chr11:118448062(+) A-G intron -    22484847 chr11:118448594(+) A-G intron -    22484847 chr11:118448623(+) A-G intron -    22484847 chr11:118448638(+) A-G intron -    22484847 chr11:118448646(+) A-G intron -    22484847 chr11:118451014(+) A-G intron -    22484847 chr11:118457460(+) A-G intron -    22484847 chr11:118460840(+) A-G intron -    22484847 chr11:118464876(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARCN1	chr11:118443203-118443204(+) m6A 5'UTR       24284625//25456834//24981863 chr11:118444349-118444350(+) m6A 5'UTR//intron       24284625//25456834//24981863 chr11:118444433-118444434(+) m6A CDS//intron       24284625 chr11:118454019-118454020(+) m6A CDS//intron       24981863//27773535 chr11:118454600-118454601(+) m6A CDS//intron       24981863//27773535 chr11:118454682-118454683(+) m6A CDS//intron       24981863 chr11:118454694-118454695(+) m6A CDS//intron       24981863 chr11:118454702-118454703(+) m6A CDS//intron       24981863 chr11:118455282-118455283(+) m6A CDS//intron       26404942//27773535 chr11:118464380-118464381(+) m6A CDS//intron       26404942//22575960 chr11:118471367-118471368(+) m6A CDS//intron       27773535 chr11:118471393-118471394(+) m6A CDS//intron       27773535 chr11:118471527-118471528(+) m6A 3'UTR//intron       24284625//25456834//24981863//26404942//27773535//22575960//22608085 chr11:118471570-118471571(+) m6A 3'UTR//intron       24284625//25456834//24981863//26404942//22575960//22608085 chr11:118471606-118471607(+) m6A 3'UTR//intron       24284625//25456834//24981863//26404942//22575960//22608085 chr11:118471633-118471634(+) m6A 3'UTR//intron       24284625//25456834//24981863//26404942//22575960//22608085 chr11:118472270-118472271(+) m6A 3'UTR//intron       26404942 chr11:118472302-118472303(+) m6A 3'UTR//intron       26404942 chr11:118472315-118472316(+) m6A 3'UTR//intron       26404942 chr11:118472805-118472806(+) m6A 3'UTR       - chr11:118473389-118473390(+) m6A 3'UTR       27773535 chr11:118473499-118473500(+) m6A 3'UTR       27773535 chr11:118473546-118473547(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARCN1	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART2-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 Dovitinib       135398510

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART2-5p
Interactor2: ARCN1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg