Basic Information:

  VIRBase ID:  

VHID00291752

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART1-5p:  MIMAT0000999          SCARA5:  NM_173833     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART1-5p	SCARA5
miRBase Accession/Entrez ID	MIMAT0000999	286133
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NET33//Tesr

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SCARA5	chr8:27825305(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SCARA5	chr8:27728562-27728563(-) m6A 3'UTR       24284625 chr8:27728594-27728595(-) m6A 3'UTR       24284625//24981863 chr8:27728638-27728639(-) m6A 3'UTR       24284625 chr8:27728655-27728656(-) m6A 3'UTR       24284625 chr8:27728669-27728670(-) m6A 3'UTR       24284625 chr8:27728684-27728685(-) m6A 3'UTR       24284625 chr8:27729166-27729167(-) m6A 3'UTR       24284625 chr8:27729249-27729250(-) m6A 3'UTR       24284625//24981863 chr8:27729276-27729277(-) m6A 3'UTR       24284625//24981863 chr8:27729308-27729309(-) m6A 3'UTR       24284625//24981863 chr8:27729456-27729457(-) m6A CDS       24284625//25456834//24981863 chr8:27729489-27729490(-) m6A CDS       24284625//25456834//24981863 chr8:27729496-27729497(-) m6A CDS       24284625//25456834//24981863 chr8:27729536-27729537(-) m6A CDS       24284625//25456834//24981863 chr8:27737168-27737169(-) m6A CDS       24284625 chr8:27762287-27762288(-) m6A CDS//intron       24981863//27773536 chr8:27762311-27762312(-) m6A CDS       24981863//27773536 chr8:27764689-27764690(-) m6A CDS       27773536 chr8:27767186-27767187(-) m6A CDS       27773536 chr8:27767249-27767250(-) m6A CDS       27773536 chr8:27779104-27779105(-) m6A CDS//intron       27773536 chr8:27779131-27779132(-) m6A CDS//intron       24284625//27773536 chr8:27779146-27779147(-) m6A CDS//intron       24284625//27773536 chr8:27779230-27779231(-) m6A CDS//intron       27773536 chr8:27779263-27779264(-) m6A CDS//intron       27773536 chr8:27779488-27779489(-) m6A CDS//intron       27773536 chr8:27779516-27779517(-) m6A CDS//intron       27773536 chr8:27779593-27779594(-) m6A CDS//intron       24981863//27773536 chr8:27779602-27779603(-) m6A CDS//intron       24981863//27773536 chr8:27779644-27779645(-) m6A CDS//intron       24981863//27773536 chr8:27779683-27779684(-) m6A CDS//intron       24981863//27773536 chr8:27779707-27779708(-) m6A CDS//intron       24981863//27773536 chr8:27850076-27850077(-) m6A 5'UTR       24981863 chr8:27850090-27850091(-) m6A 5'UTR       24981863 chr8:27850113-27850114(-) m6A 5'UTR       24981863 chr8:27850183-27850184(-) m6A 5'UTR       24981863 chr8:27850199-27850200(-) m6A 5'UTR       24981863 chr8:27850234-27850235(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SCARA5	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART1-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 l-685,458       5479543 Palbociclib       5330286 Dovitinib       135398510 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART1-5p
Interactor2: SCARA5

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg