Basic Information:

  VIRBase ID:  

VHID00290960

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART1-5p:  MIMAT0000999          LRRC31:  NM_001277127     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART1-5p	LRRC31
miRBase Accession/Entrez ID	MIMAT0000999	79782
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HEL-S-293

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LRRC31	chr3:169560241(-) A-I      intronic chr3:169565200(-) A-I      intronic chr3:169560250(-) A-I      intronic chr3:169580767(-) A-I      intronic chr3:169564272(-) A-I      intronic chr3:169566342(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LRRC31	chr3:169557660-169557661(-) m6A 3'UTR       27773535 chr3:169557692-169557693(-) m6A 3'UTR       27773535 chr3:169557717-169557718(-) m6A 3'UTR       27773535 chr3:169557738-169557739(-) m6A 3'UTR       27773535 chr3:169557768-169557769(-) m6A 3'UTR       27773535 chr3:169557832-169557833(-) m6A 3'UTR//CDS       27773535 chr3:169557919-169557920(-) m6A 3'UTR//CDS       27773535 chr3:169557931-169557932(-) m6A 3'UTR//CDS       27773535 chr3:169571188-169571189(-) m6A exon//intron       27773535 chr3:169571245-169571246(-) m6A exon//intron       27773535 chr3:169571276-169571277(-) m6A exon//intron       27773535 chr3:169571364-169571365(-) m6A exon//intron       27773535 chr3:169587543-169587544(-) m6A CDS//exon       27773535 chr3:169587555-169587556(-) m6A CDS//exon       27773535 chr3:169587573-169587574(-) m6A CDS//exon       27773535 chr3:169587585-169587586(-) m6A CDS//exon       27773535 chr3:169587615-169587616(-) m6A 5'UTR//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LRRC31	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART1-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 l-685,458       5479543 Palbociclib       5330286 Dovitinib       135398510 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART1-5p
Interactor2: LRRC31

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg