Detail Information

Basic Information:


  VIRBase ID:  

VHID00289476

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART1-5p:           TYROBP:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART1-5p TYROBP
miRBase
Accession/Entrez ID		 MIMAT0000999 7305
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - DAP12//KARAP//PLOSL//PLOSL1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TYROBP
chr19:36397157(-) A-I      intronic
chr19:36397131(-) A-I      intronic
chr19:36397698(-) A-I      intronic
chr19:36397286(-) A-I      intronic
chr19:36397270(-) A-I      intronic
chr19:36397263(-) A-I      intronic
chr19:36397247(-) A-I      intronic
chr19:36397130(-) A-I      intronic
chr19:36397117(-) A-I      intronic
chr19:36397090(-) A-I      intronic
chr19:36396779(-) A-I      intronic
chr19:36396652(-) A-I      intronic
chr19:36396498(-) A-I      intronic
chr19:36396687(-) A-I      intronic
chr19:36396986(-) A-I      intronic
chr19:36397806(-) A-I      intronic
chr19:36396600(-) A-I      intronic
chr19:36396715(-) A-I      intronic
chr19:36396449(-) A-I      intronic
chr19:36396512(-) A-I      intronic
chr19:36397899(-) A-I      intronic
chr19:36396733(-) A-I      intronic
chr19:36397898(-) A-I      intronic
chr19:36396743(-) A-I      intronic
chr19:36397766(-) A-I      intronic
chr19:36396932(-) A-I      intronic
chr19:36397104(-) A-I      intronic
chr19:36396978(-) A-I      intronic
chr19:36396698(-) A-I      intronic
chr19:36396923(-) A-I      intronic
chr19:36397098(-) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TYROBP
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART1-5p
Panobinostat       6918837
Irinotecan       60838
Topotecan       60700
l-685,458       5479543
Palbociclib       5330286
Dovitinib       135398510
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART1-5p
Interactor2: TYROBP

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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