Basic Information:

  VIRBase ID:  

VHID00289305

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART1-5p:  MIMAT0000999          RAB13:  NR_073553     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART1-5p	RAB13
miRBase Accession/Entrez ID	MIMAT0000999	5872
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GIG4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RAB13	chr1:153954275-153954276(-) m6A 3'UTR//exon       24209618//25456834//24981863//27773535//22608085 chr1:153954299-153954300(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr1:153954528-153954529(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:153954539-153954540(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:153954571-153954572(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//27773535//27371828//27773536//22575960//22608085 chr1:153954599-153954600(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960 chr1:153954615-153954616(-) m6A CDS//exon       24284625//24209618//24981863//26404942//27773535//27371828//27773536 chr1:153954717-153954718(-) m6A exon//intron       24209618//24981863//27773535//27371828//27773536 chr1:153954847-153954848(-) m6A exon//intron       24981863 chr1:153954897-153954898(-) m6A CDS//exon       24981863 chr1:153954942-153954943(-) m6A exon//intron       24981863 chr1:153955042-153955043(-) m6A CDS//exon       24981863 chr1:153955125-153955126(-) m6A exon//intron       24981863 chr1:153955164-153955165(-) m6A exon//intron       24981863 chr1:153955246-153955247(-) m6A CDS//exon       24981863//27773535 chr1:153955313-153955314(-) m6A exon//intron       24981863//27773535 chr1:153955396-153955397(-) m6A exon//intron       27773535 chr1:153955976-153955977(-) m6A exon//intron       27773535 chr1:153956028-153956029(-) m6A 5'UTR//CDS//exon       27773535 chr1:153956054-153956055(-) m6A 5'UTR//CDS//exon       27773535 chr1:153957207-153957208(-) m6A 5'UTR//CDS//exon       27773535 chr1:153958620-153958621(-) m6A CDS//exon       24981863 chr1:153958648-153958649(-) m6A CDS//exon       24981863 chr1:153958665-153958666(-) m6A CDS//exon       24981863 chr1:153958818-153958819(-) m6A 5'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RAB13	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART1-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 l-685,458       5479543 Palbociclib       5330286 Dovitinib       135398510 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART1-5p
Interactor2: RAB13

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg