Basic Information:

  VIRBase ID:  

VHID00289291

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6002

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART1-5p:  MIMAT0000999          PTPN9:  NM_002833     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART1-5p	PTPN9
miRBase Accession/Entrez ID	MIMAT0000999	5780
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MEG2//PTPMEG2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PTPN9	chr15:75766738(-) A-I      intronic chr15:75766743(-) A-I      intronic chr15:75766774(-) A-I      intronic chr15:75766777(-) A-I      intronic chr15:75770217(-) A-I      intronic chr15:75793798(-) A-I      intronic chr15:75859448(-) A-I      intronic chr15:75810661(-) A-I      intronic chr15:75856565(-) A-I      intronic chr15:75806838(-) A-I      intronic chr15:75793823(-) A-I      intronic chr15:75802755(-) A-I      intronic chr15:75841666(-) A-I      intronic chr15:75810718(-) A-I      intronic chr15:75794003(-) A-I      intronic chr15:75810724(-) A-I      intronic chr15:75802754(-) A-I      intronic chr15:75793981(-) A-I      intronic chr15:75802794(-) A-I      intronic chr15:75793843(-) A-I      intronic chr15:75793835(-) A-I      intronic chr15:75793833(-) A-I      intronic chr15:75793802(-) A-I      intronic chr15:75841644(-) A-I      intronic chr15:75833521(-) A-I      intronic chr15:75841133(-) A-I      intronic chr15:75840809(-) A-I      intronic chr15:75818234(-) A-I      intronic chr15:75818511(-) A-I      intronic chr15:75818529(-) A-I      intronic chr15:75820102(-) A-I      intronic chr15:75820111(-) A-I      intronic chr15:75820115(-) A-I      intronic chr15:75820791(-) A-I      intronic chr15:75821505(-) A-I      intronic chr15:75823999(-) A-I      intronic chr15:75824069(-) A-I      intronic chr15:75824073(-) A-I      intronic chr15:75824105(-) A-I      intronic chr15:75825697(-) A-I      intronic chr15:75825708(-) A-I      intronic chr15:75825711(-) A-I      intronic chr15:75826916(-) A-I      intronic chr15:75827057(-) A-I      intronic chr15:75827111(-) A-I      intronic chr15:75840793(-) A-I      intronic chr15:75810510(-) A-I      intronic chr15:75840776(-) A-I      intronic chr15:75840767(-) A-I      intronic chr15:75792645(-) A-I      intronic chr15:75792816(-) A-I      intronic chr15:75793166(-) A-I      intronic chr15:75793868(-) A-I      intronic chr15:75793874(-) A-I      intronic chr15:75793889(-) A-I      intronic chr15:75793949(-) A-I      intronic chr15:75793953(-) A-I      intronic chr15:75794089(-) A-I      intronic chr15:75794859(-) A-I      intronic chr15:75800598(-) A-I      intronic chr15:75803695(-) A-I      intronic chr15:75763994(-) A-I      intronic chr15:75792637(-) A-I      intronic chr15:75792606(-) A-I      intronic chr15:75792601(-) A-I      intronic chr15:75792584(-) A-I      intronic chr15:75791911(-) A-I      intronic chr15:75791875(-) A-I      intronic chr15:75791777(-) A-I      intronic chr15:75790453(-) A-I      intronic chr15:75790415(-) A-I      intronic chr15:75790286(-) A-I      intronic chr15:75790274(-) A-I      intronic chr15:75827195(-) A-I      intronic chr15:75827202(-) A-I      intronic chr15:75827532(-) A-I      intronic chr15:75827538(-) A-I      intronic chr15:75830846(-) A-I      intronic chr15:75830971(-) A-I      intronic chr15:75831026(-) A-I      intronic chr15:75832137(-) A-I      intronic chr15:75833184(-) A-I      intronic chr15:75833216(-) A-I      intronic chr15:75811558(-) A-I      intronic chr15:75833601(-) A-I      intronic chr15:75833661(-) A-I      intronic chr15:75833845(-) A-I      intronic chr15:75834231(-) A-I      intronic chr15:75834267(-) A-I      intronic chr15:75869074(-) A-I      intronic chr15:75869066(-) A-I      intronic chr15:75869065(-) A-I      intronic chr15:75869027(-) A-I      intronic chr15:75868151(-) A-I      intronic chr15:75868148(-) A-I      intronic chr15:75867102(-) A-I      intronic chr15:75867065(-) A-I      intronic chr15:75867047(-) A-I      intronic chr15:75862433(-) A-I      intronic chr15:75862427(-) A-I      intronic chr15:75862365(-) A-I      intronic chr15:75862339(-) A-I      intronic chr15:75862332(-) A-I      intronic chr15:75862326(-) A-I      intronic chr15:75862306(-) A-I      intronic chr15:75861146(-) A-I      intronic chr15:75861078(-) A-I      intronic chr15:75860925(-) A-I      intronic chr15:75859562(-) A-I      intronic chr15:75859480(-) A-I      intronic chr15:75859453(-) A-I      intronic chr15:75859117(-) A-I      intronic chr15:75859112(-) A-I      intronic chr15:75859107(-) A-I      intronic chr15:75859094(-) A-I      intronic chr15:75859078(-) A-I      intronic chr15:75859077(-) A-I      intronic chr15:75859050(-) A-I      intronic chr15:75858963(-) A-I      intronic chr15:75858831(-) A-I      intronic chr15:75858820(-) A-I      intronic chr15:75858779(-) A-I      intronic chr15:75858778(-) A-I      intronic chr15:75858772(-) A-I      intronic chr15:75810572(-) A-I      intronic chr15:75810703(-) A-I      intronic chr15:75810712(-) A-I      intronic chr15:75810990(-) A-I      intronic chr15:75810996(-) A-I      intronic chr15:75857360(-) A-I      intronic chr15:75857356(-) A-I      intronic chr15:75857330(-) A-I      intronic chr15:75857320(-) A-I      intronic chr15:75857295(-) A-I      intronic chr15:75857080(-) A-I      intronic chr15:75856587(-) A-I      intronic chr15:75856583(-) A-I      intronic chr15:75856558(-) A-I      intronic chr15:75856535(-) A-I      intronic chr15:75855709(-) A-I      intronic chr15:75855698(-) A-I      intronic chr15:75811046(-) A-I      intronic chr15:75789115(-) A-I      intronic chr15:75811561(-) A-I      intronic chr15:75812226(-) A-I      intronic chr15:75855668(-) A-I      intronic chr15:75855626(-) A-I      intronic chr15:75855568(-) A-I      intronic chr15:75854426(-) A-I      intronic chr15:75854406(-) A-I      intronic chr15:75854242(-) A-I      intronic chr15:75854143(-) A-I      intronic chr15:75854123(-) A-I      intronic chr15:75850736(-) A-I      intronic chr15:75850503(-) A-I      intronic chr15:75850306(-) A-I      intronic chr15:75849727(-) A-I      intronic chr15:75849683(-) A-I      intronic chr15:75849603(-) A-I      intronic chr15:75849549(-) A-I      intronic chr15:75849530(-) A-I      intronic chr15:75848968(-) A-I      intronic chr15:75848889(-) A-I      intronic chr15:75848887(-) A-I      intronic chr15:75848856(-) A-I      intronic chr15:75848855(-) A-I      intronic chr15:75848815(-) A-I      intronic chr15:75848273(-) A-I      intronic chr15:75848135(-) A-I      intronic chr15:75847917(-) A-I      intronic chr15:75846948(-) A-I      intronic chr15:75846947(-) A-I      intronic chr15:75846927(-) A-I      intronic chr15:75846808(-) A-I      intronic chr15:75846700(-) A-I      intronic chr15:75846645(-) A-I      intronic chr15:75844636(-) A-I      intronic chr15:75844331(-) A-I      intronic chr15:75843894(-) A-I      intronic chr15:75843880(-) A-I      intronic chr15:75843849(-) A-I      intronic chr15:75843818(-) A-I      intronic chr15:75843803(-) A-I      intronic chr15:75843793(-) A-I      intronic chr15:75842990(-) A-I      intronic chr15:75842961(-) A-I      intronic chr15:75842899(-) A-I      intronic chr15:75842885(-) A-I      intronic chr15:75842758(-) A-I      intronic chr15:75842753(-) A-I      intronic chr15:75842689(-) A-I      intronic chr15:75842676(-) A-I      intronic chr15:75842671(-) A-I      intronic chr15:75842645(-) A-I      intronic chr15:75842644(-) A-I      intronic chr15:75842622(-) A-I      intronic chr15:75842253(-) A-I      intronic chr15:75842239(-) A-I      intronic chr15:75842228(-) A-I      intronic chr15:75842193(-) A-I      intronic chr15:75841673(-) A-I      intronic chr15:75841670(-) A-I      intronic chr15:75812235(-) A-I      intronic chr15:75812387(-) A-I      intronic chr15:75813251(-) A-I      intronic chr15:75813597(-) A-I      intronic chr15:75813681(-) A-I      intronic chr15:75814030(-) A-I      intronic chr15:75814883(-) A-I      intronic chr15:75814909(-) A-I      intronic chr15:75815025(-) A-I      intronic chr15:75817673(-) A-I      intronic chr15:75817702(-) A-I      intronic chr15:75817713(-) A-I      intronic chr15:75841266(-) A-I      intronic chr15:75789080(-) A-I      intronic chr15:75762581(-) A-I      intronic chr15:75770862(-) A-I      intronic chr15:75779398(-) A-I      intronic chr15:75803736(-) A-I      intronic chr15:75779405(-) A-I      intronic chr15:75780377(-) A-I      intronic chr15:75780378(-) A-I      intronic chr15:75780387(-) A-I      intronic chr15:75780439(-) A-I      intronic chr15:75780617(-) A-I      intronic chr15:75783208(-) A-I      intronic chr15:75784446(-) A-I      intronic chr15:75805942(-) A-I      intronic chr15:75805951(-) A-I      intronic chr15:75806056(-) A-I      intronic chr15:75806702(-) A-I      intronic chr15:75806834(-) A-I      intronic chr15:75807512(-) A-I      intronic chr15:75855641(-) A-I      intronic chr15:75818160(-) A-I      intronic chr15:75807646(-) A-I      intronic chr15:75840279(-) A-I      intronic chr15:75840253(-) A-I      intronic chr15:75840202(-) A-I      intronic chr15:75840201(-) A-I      intronic chr15:75840145(-) A-I      intronic chr15:75840131(-) A-I      intronic chr15:75840113(-) A-I      intronic chr15:75839553(-) A-I      intronic chr15:75839527(-) A-I      intronic chr15:75838953(-) A-I      intronic chr15:75838908(-) A-I      intronic chr15:75838884(-) A-I      intronic chr15:75838872(-) A-I      intronic chr15:75838803(-) A-I      intronic chr15:75838283(-) A-I      intronic chr15:75838178(-) A-I      intronic chr15:75838036(-) A-I      intronic chr15:75837717(-) A-I      intronic chr15:75837664(-) A-I      intronic chr15:75837652(-) A-I      intronic chr15:75836795(-) A-I      intronic chr15:75787243(-) A-I      intronic chr15:75788358(-) A-I      intronic chr15:75789067(-) A-I      intronic chr15:75841189(-) A-I      intronic chr15:75841191(-) A-I      intronic chr15:75841199(-) A-I      intronic chr15:75841200(-) A-I      intronic chr15:75779399(-) A-I      intronic chr15:75770670(-) A-I      intronic chr15:75770713(-) A-I      intronic chr15:75770718(-) A-I      intronic chr15:75770719(-) A-I      intronic chr15:75770839(-) A-I      intronic chr15:75770452(-) A-I      intronic chr15:75768893(-) A-I      intronic chr15:75768851(-) A-I      intronic chr15:75768850(-) A-I      intronic chr15:75768794(-) A-I      intronic chr15:75768361(-) A-I      intronic chr15:75768276(-) A-I      intronic chr15:75765846(-) A-I      intronic chr15:75765232(-) A-I      intronic chr15:75765213(-) A-I      intronic chr15:75765203(-) A-I      intronic chr15:75765202(-) A-I      intronic chr15:75764544(-) A-I      intronic chr15:75834382(-) A-I      intronic chr15:75841159(-) A-I      intronic chr15:75827521(-) A-I      intronic chr15:75860805(-) A-I      intronic chr15:75820114(-) A-I      intronic chr15:75827270(-) A-I      intronic chr15:75814008(-) A-I      intronic chr15:75770653(-) A-I      intronic chr15:75855755(-) A-I      intronic chr15:75844279(-) A-I      intronic chr15:75868490(-) A-I      intronic chr15:75859632(-) A-I      intronic chr15:75858968(-) A-I      intronic chr15:75825739(-) A-I      intronic chr15:75827476(-) A-I      intronic chr15:75785444(-) A-I      intronic chr15:75860148(-) A-I      intronic chr15:75784489(-) A-I      intronic chr15:75818264(-) A-I      intronic chr15:75841625(-) A-I      intronic chr15:75789015(-) A-I      intronic chr15:75842980(-) A-I      intronic chr15:75843237(-) A-I      intronic chr15:75788466(-) A-I      intronic chr15:75840800(-) A-I      intronic chr15:75854449(-) A-I      intronic chr15:75833344(-) A-I      intronic chr15:75833593(-) A-I      intronic chr15:75857126(-) A-I      intronic chr15:75792404(-) A-I      intronic chr15:75867587(-) A-I      intronic chr15:75838828(-) A-I      intronic chr15:75822395(-) A-I      intronic chr15:75802243(-) A-I      intronic chr15:75793960(-) A-I      intronic chr15:75769853(-) A-I      intronic chr15:75848316(-) A-I      intronic chr15:75824032(-) A-I      intronic chr15:75832249(-) A-I      intronic chr15:75824134(-) A-I      intronic chr15:75834296(-) A-I      intronic chr15:75850622(-) A-I      intronic chr15:75862248(-) A-I      intronic chr15:75853395(-) A-I      intronic chr15:75814896(-) A-I      intronic chr15:75840280(-) A-I      intronic chr15:75844665(-) A-I      intronic chr15:75843900(-) A-I      intronic chr15:75818111(-) A-I      intronic chr15:75783071(-) A-I      intronic chr15:75771617(-) A-I      intronic chr15:75820153(-) A-I      intronic chr15:75780473(-) A-I      intronic chr15:75862432(-) A-I      intronic chr15:75854188(-) A-I      intronic chr15:75859610(-) A-I      intronic chr15:75836864(-) A-I      intronic chr15:75821501(-) A-I      intronic chr15:75789090(-) A-I      intronic chr15:75855707(-) A-I      intronic chr15:75814948(-) A-I      intronic chr15:75790368(-) A-I      intronic chr15:75803671(-) A-I      intronic chr15:75855732(-) A-I      intronic chr15:75848965(-) A-I      intronic chr15:75861963(-) A-I      intronic chr15:75822085(-) A-I      intronic chr15:75787351(-) A-I      intronic chr15:75843078(-) A-I      intronic chr15:75859494(-) A-I      intronic chr15:75768873(-) A-I      intronic chr15:75838207(-) A-I      intronic chr15:75857359(-) A-I      intronic chr15:75794053(-) A-I      intronic chr15:75821221(-) A-I      intronic chr15:75855577(-) A-I      intronic chr15:75768332(-) A-I      intronic chr15:75770278(-) A-I      intronic chr15:75839554(-) A-I      intronic chr15:75789750(-) A-I      intronic chr15:75784486(-) A-I      intronic chr15:75800649(-) A-I      intronic chr15:75842167(-) A-I      intronic chr15:75770543(-) A-I      intronic chr15:75810668(-) A-I      intronic chr15:75785322(-) A-I      intronic chr15:75765226(-) A-I      intronic chr15:75820089(-) A-I      intronic chr15:75832651(-) A-I      intronic chr15:75794702(-) A-I      intronic chr15:75848543(-) A-I      intronic chr15:75824075(-) A-I      intronic chr15:75770310(-) A-I      intronic chr15:75788976(-) A-I      intronic chr15:75838728(-) A-I      intronic chr15:75855801(-) A-I      intronic chr15:75839434(-) A-I      intronic chr15:75804316(-) A-I      intronic chr15:75862300(-) A-I      intronic chr15:75855810(-) A-I      intronic chr15:75834094(-) A-I      intronic chr15:75842150(-) A-I      intronic chr15:75839455(-) A-I      intronic chr15:75842229(-) A-I      intronic chr15:75793884(-) A-I      intronic chr15:75806698(-) A-I      intronic chr15:75858868(-) A-I      intronic chr15:75787121(-) A-I      intronic chr15:75840144(-) A-I      intronic chr15:75855678(-) A-I      intronic chr15:75864551(-) A-I      intronic chr15:75793903(-) A-I      intronic chr15:75787809(-) A-I      intronic chr15:75833697(-) A-I      intronic chr15:75826940(-) A-I      intronic chr15:75787120(-) A-I      intronic chr15:75792018(-) A-I      intronic chr15:75857068(-) A-I      intronic chr15:75862340(-) A-I      intronic chr15:75768793(-) A-I      intronic chr15:75792262(-) A-I      intronic chr15:75794006(-) A-I      intronic chr15:75842247(-) A-I      intronic chr15:75833201(-) A-I      intronic chr15:75771591(-) A-I      intronic chr15:75813930(-) A-I      intronic chr15:75818528(-) A-I      intronic chr15:75810751(-) A-I      intronic chr15:75849706(-) A-I      intronic chr15:75785243(-) A-I      intronic chr15:75840824(-) A-I      intronic chr15:75768262(-) A-I      intronic chr15:75768838(-) A-I      intronic chr15:75859111(-) A-I      intronic chr15:75821507(-) A-I      intronic chr15:75784378(-) A-I      intronic chr15:75844369(-) A-I      intronic chr15:75854316(-) A-I      intronic chr15:75857280(-) A-I      intronic chr15:75810611(-) A-I      intronic chr15:75788975(-) A-I      intronic chr15:75842284(-) A-I      intronic chr15:75840195(-) A-I      intronic chr15:75840286(-) A-I      intronic chr15:75844270(-) A-I      intronic chr15:75841815(-) A-I      intronic chr15:75838280(-) A-I      intronic chr15:75818397(-) A-I      intronic chr15:75806328(-) A-I      intronic chr15:75859157(-) A-I      intronic chr15:75803749(-) A-I      intronic chr15:75834077(-) A-I      intronic chr15:75780522(-) A-I      intronic chr15:75856572(-) A-I      intronic chr15:75867244(-) A-I      intronic chr15:75858830(-) A-I      intronic chr15:75794015(-) A-I      intronic chr15:75802824(-) A-I      intronic chr15:75803690(-) A-I      intronic chr15:75831022(-) A-I      intronic chr15:75821456(-) A-I      intronic chr15:75854483(-) A-I      intronic chr15:75789075(-) A-I      intronic chr15:75839524(-) A-I      intronic chr15:75792875(-) A-I      intronic chr15:75825875(-) A-I      intronic chr15:75839433(-) A-I      intronic chr15:75824521(-) A-I      intronic chr15:75765868(-) A-I      intronic chr15:75842215(-) A-I      intronic chr15:75822380(-) A-I      intronic chr15:75806358(-) A-I      intronic chr15:75859163(-) A-I      intronic chr15:75794713(-) A-I      intronic chr15:75856505(-) A-I      intronic chr15:75827252(-) A-I      intronic chr15:75793890(-) A-I      intronic chr15:75830779(-) A-I      intronic chr15:75793848(-) A-I      intronic chr15:75802853(-) A-I      intronic chr15:75814050(-) A-I      intronic chr15:75843829(-) A-I      intronic chr15:75826861(-) A-I      intronic chr15:75853197(-) A-I      intronic chr15:75784487(-) A-I      intronic chr15:75806717(-) A-I      intronic chr15:75820158(-) A-I      intronic chr15:75793014(-) A-I      intronic chr15:75862344(-) A-I      intronic chr15:75784300(-) A-I      intronic chr15:75848101(-) A-I      intronic chr15:75824064(-) A-I      intronic chr15:75855723(-) A-I      intronic chr15:75836760(-) A-I      intronic chr15:75768368(-) A-I      intronic chr15:75812094(-) A-I      intronic chr15:75843045(-) A-I      intronic chr15:75794389(-) A-I      intronic chr15:75807601(-) A-I      intronic chr15:75788910(-) A-I      intronic chr15:75855733(-) A-I      intronic chr15:75859126(-) A-I      intronic chr15:75812086(-) A-I      intronic chr15:75853982(-) A-I      intronic chr15:75820778(-) A-I      intronic chr15:75844266(-) A-I      intronic chr15:75789005(-) A-I      intronic chr15:75812873(-) A-I      intronic chr15:75859137(-) A-I      intronic chr15:75839374(-) A-I      intronic chr15:75833507(-) A-I      intronic chr15:75834368(-) A-I      intronic chr15:75841789(-) A-I      intronic chr15:75789764(-) A-I      intronic chr15:75832205(-) A-I      intronic chr15:75814011(-) A-I      intronic chr15:75833162(-) A-I      intronic chr15:75844666(-) A-I      intronic chr15:75818606(-) A-I      intronic chr15:75777287(-) A-I      intronic chr15:75812225(-) A-I      intronic chr15:75762062(-) A-I      intronic chr15:75858857(-) A-I      intronic chr15:75810536(-) A-I      intronic chr15:75788904(-) A-I      intronic chr15:75787196(-) A-I      intronic chr15:75789016(-) A-I      intronic chr15:75770885(-) A-I      intronic chr15:75830291(-) A-I      intronic chr15:75833540(-) A-I      intronic chr15:75792622(-) A-I      intronic chr15:75833325(-) A-I      intronic chr15:75833596(-) A-I      intronic chr15:75784333(-) A-I      intronic chr15:75848039(-) A-I      intronic chr15:75860740(-) A-I      intronic chr15:75842886(-) A-I      intronic chr15:75789121(-) A-I      intronic chr15:75860081(-) A-I      intronic chr15:75841816(-) A-I      intronic chr15:75806277(-) A-I      intronic chr15:75842884(-) A-I      intronic chr15:75824595(-) A-I      intronic chr15:75825701(-) A-I      intronic chr15:75842623(-) A-I      intronic chr15:75800680(-) A-I      intronic chr15:75792768(-) A-I      intronic chr15:75792758(-) A-I      intronic chr15:75859231(-) A-I      intronic chr15:75785332(-) A-I      intronic chr15:75859485(-) A-I      intronic chr15:75806318(-) A-I      intronic chr15:75821206(-) A-I      intronic chr15:75762618(-) A-I      intronic chr15:75824072(-) A-I      intronic chr15:75842962(-) A-I      intronic chr15:75867025(-) A-I      intronic chr15:75833044(-) A-I      intronic chr15:75843018(-) A-I      intronic chr15:75843549(-) A-I      intronic chr15:75852962(-) A-I      intronic chr15:75840725(-) A-I      intronic chr15:75867125(-) A-I      intronic chr15:75854489(-) A-I      intronic chr15:75807605(-) A-I      intronic chr15:75781830(-) A-I      intronic chr15:75793994(-) A-I      intronic chr15:75840735(-) A-I      intronic chr15:75848257(-) A-I      intronic chr15:75818475(-) A-I      intronic chr15:75854466(-) A-I      intronic chr15:75814788(-) A-I      intronic chr15:75844303(-) A-I      intronic chr15:75793941(-) A-I      intronic chr15:75818515(-) A-I      intronic chr15:75859605(-) A-I      intronic chr15:75813106(-) A-I      intronic chr15:75847974(-) A-I      intronic chr15:75790346(-) A-I      intronic chr15:75842683(-) A-I      intronic chr15:75832296(-) A-I      intronic chr15:75842911(-) A-I      intronic chr15:75802242(-) A-I      intronic chr15:75833398(-) A-I      intronic chr15:75856538(-) A-I      intronic chr15:75794666(-) A-I      intronic chr15:75844709(-) A-I      intronic chr15:75785396(-) A-I      intronic chr15:75867412(-) A-I      intronic chr15:75788403(-) A-I      intronic chr15:75850713(-) A-I      intronic chr15:75790425(-) A-I      intronic chr15:75820145(-) A-I      intronic chr15:75844216(-) A-I      intronic chr15:75800650(-) A-I      intronic chr15:75842220(-) A-I      intronic chr15:75846673(-) A-I      intronic chr15:75770313(-) A-I      intronic chr15:75793184(-) A-I      intronic chr15:75843016(-) A-I      intronic chr15:75787788(-) A-I      intronic chr15:75770267(-) A-I      intronic chr15:75830817(-) A-I      intronic chr15:75786926(-) A-I      intronic chr15:75821220(-) A-I      intronic chr15:75857054(-) A-I      intronic chr15:75854916(-) A-I      intronic chr15:75859236(-) A-I      intronic chr15:75856578(-) A-I      intronic chr15:75804322(-) A-I      intronic chr15:75832294(-) A-I      intronic chr15:75813542(-) A-I      intronic chr15:75770611(-) A-I      intronic chr15:75833176(-) A-I      intronic chr15:75802795(-) A-I      intronic chr15:75832772(-) A-I      intronic chr15:75859459(-) A-I      intronic chr15:75827214(-) A-I      intronic chr15:75799919(-) A-I      intronic chr15:75857135(-) A-I      intronic chr15:75858934(-) A-I      intronic chr15:75766617(-) A-I      intronic chr15:75868461(-) A-I      intronic chr15:75842301(-) A-I      intronic chr15:75827148(-) A-I      intronic chr15:75848997(-) A-I      intronic chr15:75855796(-) A-I      intronic chr15:75860754(-) A-I      intronic chr15:75833912(-) A-I      intronic chr15:75813416(-) A-I      intronic chr15:75770320(-) A-I      intronic chr15:75848891(-) A-I      intronic chr15:75762785(-) A-I      intronic chr15:75841724(-) A-I      intronic chr15:75841653(-) A-I      intronic chr15:75793847(-) A-I      intronic chr15:75818497(-) A-I      intronic chr15:75833298(-) A-I      intronic chr15:75789137(-) A-I      intronic chr15:75770453(-) A-I      intronic chr15:75806820(-) A-I      intronic chr15:75858874(-) A-I      intronic chr15:75833908(-) A-I      intronic chr15:75833497(-) A-I      intronic chr15:75768358(-) A-I      intronic chr15:75803804(-) A-I      intronic chr15:75855775(-) A-I      intronic chr15:75763822(-) A-I      intronic chr15:75811547(-) A-I      intronic chr15:75766616(-) A-I      intronic chr15:75837683(-) A-I      intronic chr15:75844293(-) A-I      intronic chr15:75807982(-) A-I      intronic chr15:75794072(-) A-I      intronic chr15:75857134(-) A-I      intronic chr15:75842153(-) A-I      intronic chr15:75859182(-) A-I      intronic chr15:75862394(-) A-I      intronic chr15:75860662(-) A-I      intronic chr15:75849600(-) A-I      intronic chr15:75845337(-) A-I      intronic chr15:75843782(-) A-I      intronic chr15:75769764(-) A-I      intronic chr15:75859083(-) A-I      intronic chr15:75826823(-) A-I      intronic chr15:75794011(-) A-I      intronic chr15:75824081(-) A-I      intronic chr15:75853194(-) A-I      intronic chr15:75846674(-) A-I      intronic chr15:75841368(-) A-I      intronic chr15:75852995(-) A-I      intronic chr15:75859495(-) A-I      intronic chr15:75839520(-) A-I      intronic chr15:75794075(-) A-I      intronic chr15:75770279(-) A-I      intronic chr15:75857379(-) A-I      intronic chr15:75834196(-) A-I      intronic chr15:75853955(-) A-I      intronic chr15:75833104(-) A-I      intronic chr15:75768906(-) A-I      intronic chr15:75799941(-) A-I      intronic chr15:75840200(-) A-I      intronic chr15:75821466(-) A-I      intronic chr15:75811735(-) A-I      intronic chr15:75832316(-) A-I      intronic chr15:75850726(-) A-I      intronic chr15:75859468(-) A-I      intronic chr15:75826921(-) A-I      intronic chr15:75839584(-) A-I      intronic chr15:75849760(-) A-I      intronic chr15:75843865(-) A-I      intronic chr15:75850279(-) A-I      intronic chr15:75861095(-) A-I      intronic chr15:75855051(-) A-I      intronic chr15:75842098(-) A-I      intronic chr15:75818214(-) A-I      intronic chr15:75783238(-) A-I      intronic chr15:75842872(-) A-I      intronic chr15:75840234(-) A-I      intronic chr15:75824103(-) A-I      intronic chr15:75859609(-) A-I      intronic chr15:75803756(-) A-I      intronic chr15:75868138(-) A-I      intronic chr15:75813969(-) A-I      intronic chr15:75859521(-) A-I      intronic chr15:75839790(-) A-I      intronic chr15:75792865(-) A-I      intronic chr15:75855658(-) A-I      intronic chr15:75806283(-) A-I      intronic chr15:75783104(-) A-I      intronic chr15:75868422(-) A-I      intronic chr15:75842094(-) A-I      intronic chr15:75793957(-) A-I      intronic chr15:75825874(-) A-I      intronic chr15:75818429(-) A-I      intronic chr15:75824585(-) A-I      intronic chr15:75846450(-) A-I      intronic chr15:75791973(-) A-I      intronic chr15:75802689(-) A-I      intronic chr15:75842279(-) A-I      intronic chr15:75856564(-) A-I      intronic chr15:75855686(-) A-I      intronic chr15:75804767(-) A-I      intronic chr15:75765865(-) A-I      intronic chr15:75820085(-) A-I      intronic chr15:75768340(-) A-I      intronic chr15:75859538(-) A-I      intronic chr15:75832150(-) A-I      intronic chr15:75802758(-) A-I      intronic chr15:75803704(-) A-I      intronic chr15:75843006(-) A-I      intronic chr15:75862258(-) A-I      intronic chr15:75788428(-) A-I      intronic chr15:75822460(-) A-I      intronic chr15:75826849(-) A-I      intronic chr15:75850363(-) A-I      intronic chr15:75850810(-) A-I      intronic chr15:75840252(-) A-I      intronic chr15:75859517(-) A-I      intronic chr15:75856679(-) A-I      intronic chr15:75802122(-) A-I      intronic chr15:75848321(-) A-I      intronic chr15:75843762(-) A-I      intronic chr15:75832728(-) A-I      intronic chr15:75862388(-) A-I      intronic chr15:75789580(-) A-I      intronic chr15:75793998(-) A-I      intronic chr15:75806918(-) A-I      intronic chr15:75810674(-) A-I      intronic chr15:75813223(-) A-I      intronic chr15:75843690(-) A-I      intronic chr15:75781695(-) A-I      intronic chr15:75791885(-) A-I      intronic chr15:75806189(-) A-I      intronic chr15:75823996(-) A-I      intronic chr15:75818222(-) A-I      intronic chr15:75855667(-) A-I      intronic chr15:75831842(-) A-I      intronic chr15:75836868(-) A-I      intronic chr15:75842963(-) A-I      intronic chr15:75818487(-) A-I      intronic chr15:75767857(-) A-I      intronic chr15:75783449(-) A-I      intronic chr15:75826832(-) A-I      intronic chr15:75765826(-) A-I      intronic chr15:75768764(-) A-I      intronic chr15:75812085(-) A-I      intronic chr15:75862197(-) A-I      intronic chr15:75853117(-) A-I      intronic chr15:75830881(-) A-I      intronic chr15:75834235(-) A-I      intronic chr15:75855694(-) A-I      intronic chr15:75783146(-) A-I      intronic chr15:75777298(-) A-I      intronic chr15:75844712(-) A-I      intronic chr15:75844648(-) A-I      intronic chr15:75830868(-) A-I      intronic chr15:75793202(-) A-I      intronic chr15:75771645(-) A-I      intronic chr15:75813922(-) A-I      intronic chr15:75861126(-) A-I      intronic chr15:75812213(-) A-I      intronic chr15:75857132(-) A-I      intronic chr15:75813437(-) A-I      intronic chr15:75825781(-) A-I      intronic chr15:75810456(-) A-I      intronic chr15:75858901(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PTPN9	chr15:75777287(-) A-I intron -    21960545 chr15:75845403(-) A-I intron -    21960545 chr15:75845411(-) A-I intron -    21960545 chr15:75768340(-) A-G intron -    22484847 chr15:75803804(-) A-G intron -    22484847 chr15:75820089(-) A-G intron -    22484847 chr15:75843865(-) A-G intron -    22484847 chr15:75860871(-) G-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PTPN9	chr15:75759463-75759464(-) m6A 3'UTR       27773535 chr15:75759560-75759561(-) m6A 3'UTR       27773535 chr15:75759649-75759650(-) m6A 3'UTR       24981863//27773535 chr15:75759690-75759691(-) m6A 3'UTR       24981863//27773535 chr15:75759698-75759699(-) m6A 3'UTR       24981863//27773535 chr15:75761057-75761058(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr15:75761067-75761068(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr15:75761097-75761098(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr15:75761134-75761135(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr15:75761213-75761214(-) m6A CDS//exon       24284625//24981863//27773535//27371828 chr15:75761237-75761238(-) m6A CDS//exon       24284625//24981863//27773535 chr15:75761305-75761306(-) m6A CDS//exon       27773535 chr15:75762135-75762136(-) m6A CDS//exon       27773535 chr15:75798042-75798043(-) m6A CDS//exon       24981863 chr15:75798057-75798058(-) m6A CDS//exon       24981863 chr15:75798105-75798106(-) m6A CDS//exon       24981863//22608085 chr15:75798156-75798157(-) m6A CDS//exon       24981863//22608085 chr15:75798162-75798163(-) m6A CDS       24981863//22608085 chr15:75798282-75798283(-) m6A CDS       27773535 chr15:75798328-75798329(-) m6A CDS       27773535 chr15:75815575-75815576(-) m6A CDS       - chr15:75816591-75816592(-) m6A CDS       - chr15:75816603-75816604(-) m6A CDS       - chr15:75816635-75816636(-) m6A CDS       27773535 chr15:75819565-75819566(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PTPN9	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome HEK-293 cells     22199352

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART1-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 l-685,458       5479543 Palbociclib       5330286 Dovitinib       135398510 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART1-5p
Interactor2: PTPN9

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	miRanda//PARalyzer//Targetscan
Support Database	ViRBase//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	ViRBase//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-1 cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.