Basic Information:

  VIRBase ID:  

VHID00289206

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.8939

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART1-5p:  MIMAT0000999          PDE7A:  NM_001242318     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART1-5p	PDE7A
miRBase Accession/Entrez ID	MIMAT0000999	5150
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HCP1//PDE7

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PDE7A	chr8:66642597(-) A-I      intronic chr8:66642997(-) A-I      intronic chr8:66643046(-) A-I      intronic chr8:66644930(-) A-I      intronic chr8:66644947(-) A-I      intronic chr8:66647763(-) A-I      intronic chr8:66648759(-) A-I      intronic chr8:66648838(-) A-I      intronic chr8:66669883(-) A-I      intronic chr8:66669939(-) A-I      intronic chr8:66689383(-) A-I      intronic chr8:66689407(-) A-I      intronic chr8:66689411(-) A-I      intronic chr8:66689426(-) A-I      intronic chr8:66682571(-) A-I      intronic chr8:66682550(-) A-I      intronic chr8:66682536(-) A-I      intronic chr8:66682535(-) A-I      intronic chr8:66680833(-) A-I      intronic chr8:66680797(-) A-I      intronic chr8:66680785(-) A-I      intronic chr8:66682574(-) A-I      intronic chr8:66680595(-) A-I      intronic chr8:66733116(-) A-I      intronic chr8:66732998(-) A-I      intronic chr8:66732994(-) A-I      intronic chr8:66732628(-) A-I      intronic chr8:66732605(-) A-I      intronic chr8:66732587(-) A-I      intronic chr8:66732574(-) A-I      intronic chr8:66732509(-) A-I      intronic chr8:66732483(-) A-I      intronic chr8:66732413(-) A-I      intronic chr8:66732374(-) A-I      intronic chr8:66731545(-) A-I      intronic chr8:66731521(-) A-I      intronic chr8:66731514(-) A-I      intronic chr8:66731509(-) A-I      intronic chr8:66731505(-) A-I      intronic chr8:66731387(-) A-I      intronic chr8:66730259(-) A-I      intronic chr8:66730192(-) A-I      intronic chr8:66730177(-) A-I      intronic chr8:66730162(-) A-I      intronic chr8:66730155(-) A-I      intronic chr8:66730116(-) A-I      intronic chr8:66730109(-) A-I      intronic chr8:66727253(-) A-I      intronic chr8:66727234(-) A-I      intronic chr8:66727233(-) A-I      intronic chr8:66727229(-) A-I      intronic chr8:66727216(-) A-I      intronic chr8:66688027(-) A-I      intronic chr8:66688017(-) A-I      intronic chr8:66687931(-) A-I      intronic chr8:66678472(-) A-I      intronic chr8:66678453(-) A-I      intronic chr8:66678385(-) A-I      intronic chr8:66678384(-) A-I      intronic chr8:66678369(-) A-I      intronic chr8:66678354(-) A-I      intronic chr8:66678345(-) A-I      intronic chr8:66678319(-) A-I      intronic chr8:66678318(-) A-I      intronic chr8:66678313(-) A-I      intronic chr8:66673572(-) A-I      intronic chr8:66673571(-) A-I      intronic chr8:66673566(-) A-I      intronic chr8:66673505(-) A-I      intronic chr8:66673504(-) A-I      intronic chr8:66673502(-) A-I      intronic chr8:66673489(-) A-I      intronic chr8:66673439(-) A-I      intronic chr8:66670057(-) A-I      intronic chr8:66669962(-) A-I      intronic chr8:66669911(-) A-I      intronic chr8:66667469(-) A-I      intronic chr8:66667396(-) A-I      intronic chr8:66667358(-) A-I      intronic chr8:66667204(-) A-I      intronic chr8:66667153(-) A-I      intronic chr8:66667138(-) A-I      intronic chr8:66667118(-) A-I      intronic chr8:66666843(-) A-I      intronic chr8:66666748(-) A-I      intronic chr8:66666746(-) A-I      intronic chr8:66666743(-) A-I      intronic chr8:66666742(-) A-I      intronic chr8:66666740(-) A-I      intronic chr8:66666737(-) A-I      intronic chr8:66664008(-) A-I      intronic chr8:66663904(-) A-I      intronic chr8:66650949(-) A-I      intronic chr8:66650947(-) A-I      intronic chr8:66650855(-) A-I      intronic chr8:66650846(-) A-I      intronic chr8:66649929(-) A-I      intronic chr8:66649923(-) A-I      intronic chr8:66649787(-) A-I      intronic chr8:66649341(-) A-I      intronic chr8:66649324(-) A-I      intronic chr8:66649317(-) A-I      intronic chr8:66649156(-) A-I      intronic chr8:66648743(-) A-I      intronic chr8:66648055(-) A-I      intronic chr8:66647989(-) A-I      intronic chr8:66647818(-) A-I      intronic chr8:66647802(-) A-I      intronic chr8:66647797(-) A-I      intronic chr8:66647759(-) A-I      intronic chr8:66647704(-) A-I      intronic chr8:66645757(-) A-I      intronic chr8:66645756(-) A-I      intronic chr8:66644917(-) A-I      intronic chr8:66643096(-) A-I      intronic chr8:66643095(-) A-I      intronic chr8:66643035(-) A-I      intronic chr8:66642977(-) A-I      intronic chr8:66642959(-) A-I      intronic chr8:66642904(-) A-I      intronic chr8:66642628(-) A-I      intronic chr8:66642594(-) A-I      intronic chr8:66642593(-) A-I      intronic chr8:66642590(-) A-I      intronic chr8:66642100(-) A-I      intronic chr8:66641981(-) A-I      intronic chr8:66641973(-) A-I      intronic chr8:66641910(-) A-I      intronic chr8:66641895(-) A-I      intronic chr8:66641864(-) A-I      intronic chr8:66641830(-) A-I      intronic chr8:66643049(-) A-I      intronic chr8:66650000(-) A-I      intronic chr8:66642946(-) A-I      intronic chr8:66647675(-) A-I      intronic chr8:66642906(-) A-I      intronic chr8:66642919(-) A-I      intronic chr8:66641904(-) A-I      intronic chr8:66643076(-) A-I      intronic chr8:66650802(-) A-I      intronic chr8:66642694(-) A-I      intronic chr8:66666997(-) A-I      intronic chr8:66649931(-) A-I      intronic chr8:66642031(-) A-I      intronic chr8:66649337(-) A-I      intronic chr8:66642027(-) A-I      intronic chr8:66644816(-) A-I      intronic chr8:66642544(-) A-I      intronic chr8:66732579(-) A-I      intronic chr8:66650035(-) A-I      intronic chr8:66644921(-) A-I      intronic chr8:66649293(-) A-I      intronic chr8:66667088(-) A-I      intronic chr8:66732910(-) A-I      intronic chr8:66648731(-) A-I      intronic chr8:66667191(-) A-I      intronic chr8:66648870(-) A-I      intronic chr8:66648753(-) A-I      intronic chr8:66644827(-) A-I      intronic chr8:66645738(-) A-I      intronic chr8:66642918(-) A-I      intronic chr8:66727280(-) A-I      intronic chr8:66642608(-) A-I      intronic chr8:66732903(-) A-I      intronic chr8:66644403(-) A-I      intronic chr8:66649932(-) A-I      intronic chr8:66649947(-) A-I      intronic chr8:66649892(-) A-I      intronic chr8:66650026(-) A-I      intronic chr8:66649930(-) A-I      intronic chr8:66649886(-) A-I      intronic chr8:66648891(-) A-I      intronic chr8:66648846(-) A-I      intronic chr8:66648767(-) A-I      intronic chr8:66730260(-) A-I      intronic chr8:66733057(-) A-I      intronic chr8:66645732(-) A-I      intronic chr8:66647792(-) A-I      intronic chr8:66689400(-) A-I      intronic chr8:66746075(-) A-I      intronic chr8:66634129(-) A-I      3'UTR chr8:66732597(-) A-I      intronic chr8:66648866(-) A-I      intronic chr8:66648963(-) A-I      intronic chr8:66649140(-) A-I      intronic chr8:66647711(-) A-I      intronic chr8:66649922(-) A-I      intronic chr8:66667334(-) A-I      intronic chr8:66641922(-) A-I      intronic chr8:66649924(-) A-I      intronic chr8:66649233(-) A-I      intronic chr8:66649190(-) A-I      intronic chr8:66644951(-) A-I      intronic chr8:66733004(-) A-I      intronic chr8:66667318(-) A-I      intronic chr8:66667037(-) A-I      intronic chr8:66645838(-) A-I      intronic chr8:66643114(-) A-I      intronic chr8:66643058(-) A-I      intronic chr8:66672431(-) A-I      intronic chr8:66667341(-) A-I      intronic chr8:66650935(-) A-I      intronic chr8:66732979(-) A-I      intronic chr8:66667420(-) A-I      intronic chr8:66667137(-) A-I      intronic chr8:66667459(-) A-I      intronic chr8:66733028(-) A-I      intronic chr8:66647825(-) A-I      intronic chr8:66641896(-) A-I      intronic chr8:66648814(-) A-I      intronic chr8:66731550(-) A-I      intronic chr8:66650941(-) A-I      intronic chr8:66670047(-) A-I      intronic chr8:66642945(-) A-I      intronic chr8:66667034(-) A-I      intronic chr8:66649933(-) A-I      intronic chr8:66642513(-) A-I      intronic chr8:66650905(-) A-I      intronic chr8:66666766(-) A-I      intronic chr8:66672363(-) A-I      intronic chr8:66643015(-) A-I      intronic chr8:66647819(-) A-I      intronic chr8:66685067(-) A-I      intronic chr8:66643106(-) A-I      intronic chr8:66642971(-) A-I      intronic chr8:66649329(-) A-I      intronic chr8:66648830(-) A-I      intronic chr8:66672391(-) A-I      intronic chr8:66649773(-) A-I      intronic chr8:66746155(-) A-I      intronic chr8:66672353(-) A-I      intronic chr8:66642514(-) A-I      intronic chr8:66648766(-) A-I      intronic chr8:66642584(-) A-I      intronic chr8:66642522(-) A-I      intronic chr8:66649214(-) A-I      intronic chr8:66732519(-) A-I      intronic chr8:66642647(-) A-I      intronic chr8:66643144(-) A-I      intronic chr8:66649326(-) A-I      intronic chr8:66669921(-) A-I      intronic chr8:66733003(-) A-I      intronic chr8:66649296(-) A-I      intronic chr8:66667195(-) A-I      intronic chr8:66642966(-) A-I      intronic chr8:66648821(-) A-I      intronic chr8:66644331(-) A-I      intronic chr8:66649309(-) A-I      intronic chr8:66643000(-) A-I      intronic chr8:66641831(-) A-I      intronic chr8:66647616(-) A-I      intronic chr8:66647963(-) A-I      intronic chr8:66644944(-) A-I      intronic chr8:66644525(-) A-I      intronic chr8:66643101(-) A-I      intronic chr8:66744931(-) A-I      intronic chr8:66649266(-) A-I      intronic chr8:66642071(-) A-I      intronic chr8:66644936(-) A-I      intronic chr8:66649865(-) A-I      intronic chr8:66642585(-) A-I      intronic chr8:66642017(-) A-I      intronic chr8:66649185(-) A-I      intronic chr8:66644943(-) A-I      intronic chr8:66634036(-) A-I      intronic chr8:66642583(-) A-I      intronic chr8:66642993(-) A-I      intronic chr8:66642454(-) A-I      intronic chr8:66731511(-) A-I      intronic chr8:66672366(-) A-I      intronic chr8:66643018(-) A-I      intronic chr8:66647646(-) A-I      intronic chr8:66649248(-) A-I      intronic chr8:66746077(-) A-I      intronic chr8:66650797(-) A-I      intronic chr8:66649882(-) A-I      intronic chr8:66648770(-) A-I      intronic chr8:66643071(-) A-I      intronic chr8:66648804(-) A-I      intronic chr8:66649891(-) A-I      intronic chr8:66732617(-) A-I      intronic chr8:66649215(-) A-I      intronic chr8:66642592(-) A-I      intronic chr8:66642591(-) A-I      intronic chr8:66650027(-) A-I      intronic chr8:66642470(-) A-I      intronic chr8:66649918(-) A-I      intronic chr8:66649229(-) A-I      intronic chr8:66642580(-) A-I      intronic chr8:66730254(-) A-I      intronic chr8:66647676(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PDE7A	chr8:66642454(-) A-I intron -    15342557 chr8:66642470(-) A-I intron -    15342557   //21960545 chr8:66642513(-) A-I intron -    15342557 chr8:66642514(-) A-I intron -    15342557 chr8:66642518(-) A-I intron -    15342557   //22327324 chr8:66642521(-) A-I intron -    15342557 chr8:66642522(-) A-I intron -    15342557 chr8:66642544(-) A-I intron -    15342557 chr8:66645738(-) A-I intron -    15342557 chr8:66645848(-) A-I intron -    15342557 chr8:66642583(-) A-I intron -    22327324 chr8:66642584(-) A-I intron -    22327324 chr8:66642945(-) A-I intron -    21960545   //22327324 chr8:66642966(-) A-I intron -    21960545   //22327324 chr8:66643015(-) A-I intron -    22327324 chr8:66643018(-) A-I intron -    21960545   //22327324 chr8:66643075(-) A-I intron -    22327324 chr8:66643076(-) A-I intron -    22327324 chr8:66643144(-) A-I intron -    21960545   //22327324 chr8:66648870(-) A-I intron -    22327324 chr8:66648891(-) A-I intron -    21960545   //22327324 chr8:66649865(-) A-I intron -    22327324 chr8:66649936(-) A-I intron -    22327324 chr8:66641859(-) A-I intron -    21960545 chr8:66642958(-) A-I intron -    21960545 chr8:66643014(-) A-I intron -    21960545 chr8:66643071(-) A-I intron -    21960545 chr8:66648766(-) A-I intron -    21960545 chr8:66648785(-) A-I intron -    21960545 chr8:66680660(-) A-G intron -    22484847 chr8:66680725(-) A-G intron -    22484847 chr8:66680788(-) A-G intron -    22484847 chr8:66680796(-) A-G intron -    22484847 chr8:66680800(-) A-G intron -    22484847 chr8:66680809(-) A-G intron -    22484847 chr8:66680830(-) A-G intron -    22484847 chr8:66680831(-) A-G intron -    22484847 chr8:66680853(-) A-G intron -    22484847 chr8:66682594(-) T-C intron -    22484847 chr8:66634129(-) A-G intron -    22484847 chr8:66641831(-) A-G intron -    22484847 chr8:66641859(-) A-G intron -    22484847 chr8:66641884(-) A-G intron -    22484847 chr8:66641892(-) T-C intron -    22484847 chr8:66641922(-) A-G intron -    22484847 chr8:66642017(-) A-G intron -    22484847 chr8:66642027(-) A-G intron -    22484847 chr8:66642031(-) A-G intron -    22484847 chr8:66642433(-) C-A intron -    22484847 chr8:66642518(-) A-G intron -    22484847 chr8:66642521(-) A-G intron -    22484847 chr8:66642580(-) A-G intron -    22484847 chr8:66642583(-) A-G intron -    22484847 chr8:66642584(-) A-G intron -    22484847 chr8:66642585(-) A-G intron -    22484847 chr8:66642591(-) A-G intron -    22484847 chr8:66642608(-) A-G intron -    22484847 chr8:66642906(-) A-G intron -    22484847 chr8:66642919(-) A-G intron -    22484847 chr8:66642945(-) A-G intron -    22484847 chr8:66642946(-) A-G intron -    22484847 chr8:66642949(-) T-C intron -    22484847 chr8:66642953(-) T-C intron -    22484847 chr8:66642958(-) A-G intron -    22484847 chr8:66642966(-) A-G intron -    22484847 chr8:66642971(-) A-G intron -    22484847 chr8:66643000(-) A-G intron -    22484847 chr8:66643003(-) T-C intron -    22484847 chr8:66643004(-) T-C intron -    22484847 chr8:66643013(-) T-C intron -    22484847 chr8:66643016(-) T-C intron -    22484847 chr8:66643018(-) A-G intron -    22484847 chr8:66643047(-) T-C intron -    22484847 chr8:66643050(-) A-G intron -    22484847 chr8:66643065(-) T-C intron -    22484847 chr8:66643070(-) T-C intron -    22484847 chr8:66643071(-) A-G intron -    22484847 chr8:66643075(-) A-G intron -    22484847 chr8:66643076(-) A-G intron -    22484847 chr8:66643101(-) A-G intron -    22484847 chr8:66643106(-) A-G intron -    22484847 chr8:66643111(-) A-G intron -    22484847 chr8:66643114(-) A-G intron -    22484847 chr8:66643144(-) A-G intron -    22484847 chr8:66643156(-) A-G intron -    22484847 chr8:66644296(-) A-G intron -    22484847 chr8:66644311(-) C-T intron -    22484847 chr8:66644525(-) A-G intron -    22484847 chr8:66644526(-) C-G intron -    22484847 chr8:66644827(-) A-G intron -    22484847 chr8:66644944(-) A-G intron -    22484847 chr8:66644951(-) A-G intron -    22484847 chr8:66645732(-) A-G intron -    22484847 chr8:66645838(-) A-G intron -    22484847 chr8:66645848(-) A-G intron -    22484847 chr8:66647616(-) A-G intron -    22484847 chr8:66647619(-) A-G intron -    22484847 chr8:66647672(-) A-G intron -    22484847 chr8:66647792(-) A-G intron -    22484847 chr8:66648726(-) T-C intron -    22484847 chr8:66648766(-) A-G intron -    22484847 chr8:66648770(-) A-G intron -    22484847 chr8:66648785(-) A-G intron -    22484847 chr8:66648814(-) A-G intron -    22484847 chr8:66648821(-) A-G intron -    22484847 chr8:66648824(-) A-G intron -    22484847 chr8:66648866(-) A-G intron -    22484847 chr8:66648870(-) A-G intron -    22484847 chr8:66648891(-) A-G intron -    22484847 chr8:66648935(-) A-G intron -    22484847 chr8:66648963(-) A-G intron -    22484847 chr8:66649185(-) A-G intron -    22484847 chr8:66649194(-) A-G intron -    22484847 chr8:66649293(-) A-G intron -    22484847 chr8:66649299(-) A-G intron -    22484847 chr8:66649309(-) A-G intron -    22484847 chr8:66649329(-) A-G intron -    22484847 chr8:66649783(-) T-C intron -    22484847 chr8:66649854(-) T-C intron -    22484847 chr8:66649865(-) A-G intron -    22484847 chr8:66649882(-) A-G intron -    22484847 chr8:66649886(-) A-G intron -    22484847 chr8:66649891(-) A-G intron -    22484847 chr8:66649895(-) T-C intron -    22484847 chr8:66649918(-) A-G intron -    22484847 chr8:66649922(-) A-G intron -    22484847 chr8:66649924(-) A-G intron -    22484847 chr8:66649928(-) T-C intron -    22484847 chr8:66649930(-) A-G intron -    22484847 chr8:66649932(-) A-G intron -    22484847 chr8:66649933(-) A-G intron -    22484847 chr8:66649936(-) A-G intron -    22484847 chr8:66649973(-) A-G intron -    22484847 chr8:66649991(-) A-G intron -    22484847 chr8:66649997(-) T-G intron -    22484847 chr8:66650000(-) A-G intron -    22484847 chr8:66650004(-) A-G intron -    22484847 chr8:66650027(-) A-G intron -    22484847 chr8:66650035(-) A-G intron -    22484847 chr8:66650797(-) A-G intron -    22484847 chr8:66650802(-) A-G intron -    22484847 chr8:66650927(-) G-A intron -    22484847 chr8:66650935(-) A-G intron -    22484847 chr8:66650940(-) A-G intron -    22484847 chr8:66650941(-) A-G intron -    22484847 chr8:66666710(-) A-G intron -    22484847 chr8:66666711(-) A-G intron -    22484847 chr8:66666766(-) A-G intron -    22484847 chr8:66666967(-) A-G intron -    22484847 chr8:66667034(-) A-G intron -    22484847 chr8:66667056(-) A-G intron -    22484847 chr8:66667088(-) A-G intron -    22484847 chr8:66668147(-) A-G intron -    22484847 chr8:66669916(-) A-G intron -    22484847 chr8:66669921(-) A-G intron -    22484847 chr8:66669978(-) A-G intron -    22484847 chr8:66670030(-) A-G intron -    22484847 chr8:66670036(-) A-G intron -    22484847 chr8:66670047(-) A-G intron -    22484847 chr8:66672363(-) A-G intron -    22484847 chr8:66672366(-) A-G intron -    22484847 chr8:66672391(-) A-G intron -    22484847 chr8:66672406(-) A-G intron -    22484847 chr8:66672431(-) A-G intron -    22484847 chr8:66672459(-) A-G intron -    22484847 chr8:66700023(-) C-T intron -    22484847 chr8:66724447(-) C-T intron -    22484847 chr8:66727280(-) A-G intron -    22484847 chr8:66727314(-) A-T intron -    22484847 chr8:66727315(-) G-T intron -    22484847 chr8:66730254(-) A-G intron -    22484847 chr8:66730260(-) A-G intron -    22484847 chr8:66731457(-) A-G intron -    22484847 chr8:66731511(-) A-G intron -    22484847 chr8:66731550(-) A-G intron -    22484847 chr8:66732474(-) A-G intron -    22484847 chr8:66732519(-) A-G intron -    22484847 chr8:66732545(-) A-G intron -    22484847 chr8:66732569(-) A-G intron -    22484847 chr8:66732579(-) A-G intron -    22484847 chr8:66732597(-) A-G intron -    22484847 chr8:66732617(-) A-G intron -    22484847 chr8:66732903(-) A-G intron -    22484847 chr8:66732910(-) A-G intron -    22484847 chr8:66732953(-) A-G intron -    22484847 chr8:66732979(-) A-G intron -    22484847 chr8:66733003(-) A-G intron -    22484847 chr8:66733004(-) A-G intron -    22484847 chr8:66733028(-) A-G intron -    22484847 chr8:66733052(-) A-G intron -    22484847 chr8:66733057(-) A-G intron -    22484847 chr8:66746075(-) A-G intron -    22484847 chr8:66746077(-) A-G intron -    22484847 chr8:66746155(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PDE7A	chr8:66630191-66630192(-) m6A 3'UTR       26404942 chr8:66630198-66630199(-) m6A 3'UTR       26404942 chr8:66630209-66630210(-) m6A 3'UTR       26404942 chr8:66630222-66630223(-) m6A 3'UTR       26404942 chr8:66630238-66630239(-) m6A 3'UTR       26404942 chr8:66630771-66630772(-) m6A 3'UTR       27773535 chr8:66630875-66630876(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:66630965-66630966(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr8:66630972-66630973(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr8:66630989-66630990(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr8:66630998-66630999(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr8:66631064-66631065(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22608085 chr8:66631197-66631198(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631303-66631304(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631337-66631338(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631343-66631344(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631363-66631364(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631450-66631451(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631506-66631507(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631515-66631516(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631561-66631562(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631585-66631586(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631602-66631603(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631614-66631615(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631647-66631648(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66631658-66631659(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr8:66634070-66634071(-) m6A 3'UTR//intron       24284625//24981863//27773535//22575960//22608085 chr8:66634139-66634140(-) m6A 3'UTR//intron       27773535 chr8:66637026-66637027(-) m6A CDS       27773535 chr8:66637032-66637033(-) m6A CDS       27773535 chr8:66637039-66637040(-) m6A CDS       27773535 chr8:66754096-66754097(-) m6A 5'UTR//exon//intron       24284625 chr8:66754442-66754443(-) m6A exon       25456834 chr8:66754511-66754512(-) m6A exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PDE7A	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART1-5p	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 l-685,458       5479543 Palbociclib       5330286 Dovitinib       135398510 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART1-5p
Interactor2: PDE7A

Evidence Support:

Strong-Evidence	Dual luciferase reporter assay
Weak-Evidence	PAR-CLIP
Prediction-Evidence	cRep//miRanda//PARalyzer//PITA//Targetscan
Support Database	RepTar//ViRBase//VmiReg

References:

[1]PMID	23170179	Target region	3'UTR
Source	RepTar//ViRBase	Interactor1 expression	Downregulation
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	For each of them, direct interactions between 3'UTR and EBV miRNAs were confirmed by luciferase assay but no functional assay has been performed so far (Table 2).Table 2 Validated targets from high-throughput studies. Shown are cellular targets identified by photoactivatable ribonucleoside enhanced crosslinking and immunoprecipitation (PAR-CLIP), High-throughput sequencing of RNA isolated by crosslinking immunoprecipitation (HITS-CLIP) or RNA immunoprecipitation and microarray (RIP-Chip) techniques. Validation of these targets was done using luciferase reporter assays.

[2]PMID	22291592	Target region	3'UTR
Source	RepTar//ViRBase//VmiReg	Interactor1 expression	Downregulation
Tissue or cell line	EF3D-AGO2 cells//LCL35 cells//LCL-BAC cells//LCL-BAC-D1 cells//LCL-BAC-D3 cells	Interactor2 expression	None
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.