Detail Information

Basic Information:


  VIRBase ID:  

VHID00288419

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-3:           IMMP1L:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BHRF1-3 IMMP1L
miRBase
Accession/Entrez ID		 MIMAT0000998 196294
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - IMMP1//IMP1//IMP1-LIKE

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR IMMP1L
chr11:31466319(-) A-I      intronic
chr11:31511836(-) A-I      intronic
chr11:31469810(-) A-I      intronic
chr11:31469817(-) A-I      intronic
chr11:31510269(-) A-I      intronic
chr11:31469756(-) A-I      intronic
chr11:31469769(-) A-I      intronic
chr11:31491921(-) A-I      intronic
chr11:31494825(-) A-I      intronic
chr11:31494702(-) A-I      intronic
chr11:31527957(-) A-I      intronic
chr11:31520898(-) A-I      intronic
chr11:31528038(-) A-I      intronic
chr11:31520722(-) A-I      intronic
chr11:31511795(-) A-I      intronic
chr11:31520849(-) A-I      intronic
chr11:31511791(-) A-I      intronic
chr11:31527943(-) A-I      intronic
chr11:31527961(-) A-I      intronic
chr11:31491913(-) A-I      intronic
chr11:31527980(-) A-I      intronic
chr11:31528012(-) A-I      intronic
chr11:31528068(-) A-I      intronic
chr11:31528312(-) A-I      intronic
chr11:31528341(-) A-I      intronic
chr11:31528383(-) A-I      intronic
chr11:31528714(-) A-I      intronic
chr11:31491798(-) A-I      intronic
chr11:31491795(-) A-I      intronic
chr11:31491716(-) A-I      intronic
chr11:31469744(-) A-I      intronic
chr11:31494735(-) A-I      intronic
chr11:31466313(-) A-I      intronic
chr11:31528662(-) A-I      intronic
chr11:31528707(-) A-I      intronic
chr11:31528350(-) A-I      intronic
chr11:31494801(-) A-I      intronic
chr11:31466274(-) A-I      intronic
chr11:31527982(-) A-I      intronic
chr11:31510673(-) A-I      intronic
chr11:31494725(-) A-I      intronic
chr11:31469770(-) A-I      intronic
chr11:31528049(-) A-I      intronic
chr11:31510665(-) A-I      intronic
chr11:31496188(-) A-I      intronic
chr11:31469812(-) A-I      intronic
chr11:31469850(-) A-I      intronic
chr11:31527983(-) A-I      intronic
chr11:31510664(-) A-I      intronic
chr11:31510649(-) A-I      intronic
chr11:31466252(-) A-I      intronic
chr11:31527995(-) A-I      intronic
chr11:31491705(-) A-I      intronic
chr11:31511980(-) A-I      intronic
chr11:31528645(-) A-I      intronic
chr11:31528003(-) A-I      intronic
chr11:31528252(-) A-I      intronic
chr11:31528668(-) A-I      intronic
chr11:31466316(-) A-I      intronic
chr11:31491804(-) A-I      intronic
chr11:31528814(-) A-I      intronic
chr11:31520648(-) A-I      intronic
chr11:31481652(-) A-I      intronic
chr11:31466310(-) A-I      intronic
chr11:31528066(-) A-I      intronic
chr11:31528335(-) A-I      intronic
chr11:31469773(-) A-I      intronic
chr11:31491838(-) A-I      intronic
chr11:31491919(-) A-I      intronic
chr11:31469699(-) A-I      intronic
chr11:31528304(-) A-I      intronic
chr11:31466314(-) A-I      intronic
chr11:31527908(-) A-I      intronic
chr11:31511907(-) A-I      intronic
chr11:31528019(-) A-I      intronic
chr11:31527881(-) A-I      intronic
chr11:31527955(-) A-I      intronic
chr11:31528050(-) A-I      intronic
chr11:31527951(-) A-I      intronic
chr11:31469707(-) A-I      intronic
chr11:31469774(-) A-I      intronic
chr11:31481657(-) A-I      intronic
chr11:31528622(-) A-I      intronic
chr11:31528011(-) A-I      intronic
chr11:31491812(-) A-I      intronic
chr11:31496213(-) A-I      intronic
chr11:31462211(-) A-I      intronic
chr11:31466305(-) A-I      intronic
chr11:31528702(-) A-I      intronic
chr11:31527900(-) A-I      intronic
chr11:31466315(-) A-I      intronic
chr11:31519101(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED IMMP1L
chr11:31462211(-) A-G intron -    22484847
chr11:31466310(-) A-G intron -    22484847
chr11:31466315(-) A-G intron -    22484847
chr11:31466316(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IMMP1L
chr11:31474150-31474151(-) m6A exon//intron       22608085
chr11:31474170-31474171(-) m6A exon//intron       27773535//22608085
chr11:31474224-31474225(-) m6A exon//intron       24209618//27773535//22608085
chr11:31474323-31474324(-) m6A exon//intron       25456834//27773535//27371828//22608085
chr11:31499067-31499068(-) m6A 5'UTR//exon//intron       27773535//22608085
chr11:31499148-31499149(-) m6A 5'UTR//exon//intron       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate IMMP1L
Chromatin K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BHRF1-3
Interactor2: IMMP1L

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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