Basic Information:

  VIRBase ID:  

VHID00288357

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-3:  MIMAT0000998          SPINDOC:  NM_138471     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-3	SPINDOC
miRBase Accession/Entrez ID	MIMAT0000998	144097
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C11orf84//SPIN-DOC

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SPINDOC	chr11:63587727(+) A-I      intronic chr11:63589406(+) A-I      intronic chr11:63589655(+) A-I      intronic chr11:63589694(+) A-I      intronic chr11:63589701(+) A-I      intronic chr11:63588489(+) A-I      intronic chr11:63589430(+) A-I      intronic chr11:63589443(+) A-I      intronic chr11:63589264(+) A-I      intronic chr11:63591546(+) A-I      intronic chr11:63587739(+) A-I      intronic chr11:63589741(+) A-I      intronic chr11:63589277(+) A-I      intronic chr11:63589386(+) A-I      intronic chr11:63589336(+) A-I      intronic chr11:63588481(+) A-I      intronic chr11:63589381(+) A-I      intronic chr11:63589625(+) A-I      intronic chr11:63587815(+) A-I      intronic chr11:63589619(+) A-I      intronic chr11:63586812(+) A-I      intronic chr11:63587772(+) A-I      intronic chr11:63587068(+) A-I      intronic chr11:63583507(+) A-I      intronic chr11:63587750(+) A-I      intronic chr11:63587705(+) A-I      intronic chr11:63586760(+) A-I      intronic chr11:63586763(+) A-I      intronic chr11:63586840(+) A-I      intronic chr11:63586783(+) A-I      intronic chr11:63587655(+) A-I      intronic chr11:63586849(+) A-I      intronic chr11:63586883(+) A-I      intronic chr11:63589418(+) A-I      intronic chr11:63589600(+) A-I      intronic chr11:63586905(+) A-I      intronic chr11:63586917(+) A-I      intronic chr11:63586776(+) A-I      intronic chr11:63587830(+) A-I      intronic chr11:63583428(+) A-I      intronic chr11:63589442(+) A-I      intronic chr11:63588466(+) A-I      intronic chr11:63587158(+) A-I      intronic chr11:63586702(+) A-I      intronic chr11:63587212(+) A-I      intronic chr11:63587720(+) A-I      intronic chr11:63588409(+) A-I      intronic chr11:63587708(+) A-I      intronic chr11:63586747(+) A-I      intronic chr11:63589789(+) A-I      intronic chr11:63587710(+) A-I      intronic chr11:63589620(+) A-I      intronic chr11:63589710(+) A-I      intronic chr11:63587620(+) A-I      intronic chr11:63586809(+) A-I      intronic chr11:63588449(+) A-I      intronic chr11:63589731(+) A-I      intronic chr11:63589650(+) A-I      intronic chr11:63584408(+) A-I      intronic chr11:63589404(+) A-I      intronic chr11:63588458(+) A-I      intronic chr11:63591210(+) A-I      intronic chr11:63589338(+) A-I      intronic chr11:63589723(+) A-I      intronic chr11:63587043(+) A-I      intronic chr11:63589321(+) A-I      intronic chr11:63588114(+) A-I      intronic chr11:63589387(+) A-I      intronic chr11:63586903(+) A-I      intronic chr11:63586866(+) A-I      intronic chr11:63587614(+) A-I      intronic chr11:63589274(+) A-I      intronic chr11:63589782(+) A-I      intronic chr11:63586744(+) A-I      intronic chr11:63589718(+) A-I      intronic chr11:63589360(+) A-I      intronic chr11:63589459(+) A-I      intronic chr11:63589849(+) A-I      intronic chr11:63586741(+) A-I      intronic chr11:63589644(+) A-I      intronic chr11:63586863(+) A-I      intronic chr11:63589590(+) A-I      intronic chr11:63589301(+) A-I      intronic chr11:63587709(+) A-I      intronic chr11:63588413(+) A-I      intronic chr11:63589251(+) A-I      intronic chr11:63589573(+) A-I      intronic chr11:63587693(+) A-I      intronic chr11:63586904(+) A-I      intronic chr11:63587694(+) A-I      intronic chr11:63587675(+) A-I      intronic chr11:63589314(+) A-I      intronic chr11:63589456(+) A-I      intronic chr11:63587723(+) A-I      intronic chr11:63589350(+) A-I      intronic chr11:63587108(+) A-I      intronic chr11:63589820(+) A-I      intronic chr11:63589378(+) A-I      intronic chr11:63589093(+) A-I      intronic chr11:63589653(+) A-I      intronic chr11:63586822(+) A-I      intronic chr11:63589634(+) A-I      intronic chr11:63589290(+) A-I      intronic chr11:63589717(+) A-I      intronic chr11:63588457(+) A-I      intronic chr11:63589306(+) A-I      intronic chr11:63584773(+) A-I      intronic chr11:63589583(+) A-I      intronic chr11:63589742(+) A-I      intronic chr11:63589431(+) A-I      intronic chr11:63586800(+) A-I      intronic chr11:63589410(+) A-I      intronic chr11:63589633(+) A-I      intronic chr11:63588933(+) A-I      intronic chr11:63589324(+) A-I      intronic chr11:63589482(+) A-I      intronic chr11:63589582(+) A-I      intronic chr11:63587805(+) A-I      intronic chr11:63583500(+) A-I      intronic chr11:63588473(+) A-I      intronic chr11:63589393(+) A-I      intronic chr11:63586992(+) A-I      intronic chr11:63589668(+) A-I      intronic chr11:63588403(+) A-I      intronic chr11:63589347(+) A-I      intronic chr11:63586872(+) A-I      intronic chr11:63587069(+) A-I      intronic chr11:63587237(+) A-I      intronic chr11:63589736(+) A-I      intronic chr11:63586848(+) A-I      intronic chr11:63589320(+) A-I      intronic chr11:63589669(+) A-I      intronic chr11:63587606(+) A-I      intronic chr11:63589247(+) A-I      intronic chr11:63589481(+) A-I      intronic chr11:63587062(+) A-I      intronic chr11:63589435(+) A-I      intronic chr11:63586709(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SPINDOC	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-3
Interactor2: SPINDOC

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg