Basic Information:

  VIRBase ID:  

VHID00286260

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-3p:  MIMAT0000997          UHRF2:  NR_046386     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-3p	UHRF2
miRBase Accession/Entrez ID	MIMAT0000997	115426
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NIRF//RNF107//TDRD23//URF2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	UHRF2	chr9:6488149(+) A-I      intronic chr9:6488136(+) A-I      intronic chr9:6488122(+) A-I      intronic chr9:6488112(+) A-I      intronic chr9:6488063(+) A-I      intronic chr9:6488000(+) A-I      intronic chr9:6487986(+) A-I      intronic chr9:6446593(+) A-I      intronic chr9:6446575(+) A-I      intronic chr9:6446244(+) A-I      intronic chr9:6445802(+) A-I      intronic chr9:6445764(+) A-I      intronic chr9:6445687(+) A-I      intronic chr9:6445670(+) A-I      intronic chr9:6445403(+) A-I      intronic chr9:6445394(+) A-I      intronic chr9:6444792(+) A-I      intronic chr9:6442187(+) A-I      intronic chr9:6442155(+) A-I      intronic chr9:6442104(+) A-I      intronic chr9:6441193(+) A-I      intronic chr9:6441192(+) A-I      intronic chr9:6439286(+) A-I      intronic chr9:6433028(+) A-I      intronic chr9:6431429(+) A-I      intronic chr9:6431409(+) A-I      intronic chr9:6477068(+) A-I      intronic chr9:6431406(+) A-I      intronic chr9:6487657(+) A-I      intronic chr9:6484548(+) A-I      intronic chr9:6484310(+) A-I      intronic chr9:6484296(+) A-I      intronic chr9:6483776(+) A-I      intronic chr9:6431398(+) A-I      intronic chr9:6431352(+) A-I      intronic chr9:6430244(+) A-I      intronic chr9:6430210(+) A-I      intronic chr9:6429565(+) A-I      intronic chr9:6429122(+) A-I      intronic chr9:6429058(+) A-I      intronic chr9:6427610(+) A-I      intronic chr9:6488087(+) A-I      intronic chr9:6427600(+) A-I      intronic chr9:6427540(+) A-I      intronic chr9:6488083(+) A-I      intronic chr9:6488082(+) A-I      intronic chr9:6488079(+) A-I      intronic chr9:6488064(+) A-I      intronic chr9:6488045(+) A-I      intronic chr9:6427432(+) A-I      intronic chr9:6427425(+) A-I      intronic chr9:6427409(+) A-I      intronic chr9:6477411(+) A-I      intronic chr9:6427028(+) A-I      intronic chr9:6422291(+) A-I      intronic chr9:6422282(+) A-I      intronic chr9:6422265(+) A-I      intronic chr9:6483245(+) A-I      intronic chr9:6483214(+) A-I      intronic chr9:6477406(+) A-I      intronic chr9:6483142(+) A-I      intronic chr9:6483126(+) A-I      intronic chr9:6477383(+) A-I      intronic chr9:6482763(+) A-I      intronic chr9:6482714(+) A-I      intronic chr9:6477423(+) A-I      intronic chr9:6477372(+) A-I      intronic chr9:6477405(+) A-I      intronic chr9:6477371(+) A-I      intronic chr9:6477275(+) A-I      intronic chr9:6477191(+) A-I      intronic chr9:6483218(+) A-I      intronic chr9:6476778(+) A-I      intronic chr9:6477370(+) A-I      intronic chr9:6477366(+) A-I      intronic chr9:6477364(+) A-I      intronic chr9:6477354(+) A-I      intronic chr9:6477349(+) A-I      intronic chr9:6476769(+) A-I      intronic chr9:6476760(+) A-I      intronic chr9:6476740(+) A-I      intronic chr9:6463733(+) A-I      intronic chr9:6463606(+) A-I      intronic chr9:6463183(+) A-I      intronic chr9:6462861(+) A-I      intronic chr9:6462832(+) A-I      intronic chr9:6462746(+) A-I      intronic chr9:6500230(+) A-I      intronic chr9:6491977(+) A-I      intronic chr9:6491922(+) A-I      intronic chr9:6488573(+) A-I      intronic chr9:6488566(+) A-I      intronic chr9:6488252(+) A-I      intronic chr9:6488168(+) A-I      intronic chr9:6462707(+) A-I      intronic chr9:6462699(+) A-I      intronic chr9:6461545(+) A-I      intronic chr9:6459724(+) A-I      intronic chr9:6455735(+) A-I      intronic chr9:6455730(+) A-I      intronic chr9:6446773(+) A-I      intronic chr9:6422254(+) A-I      intronic chr9:6422248(+) A-I      intronic chr9:6422247(+) A-I      intronic chr9:6422212(+) A-I      intronic chr9:6421631(+) A-I      intronic chr9:6421621(+) A-I      intronic chr9:6421556(+) A-I      intronic chr9:6420294(+) A-I      intronic chr9:6446760(+) A-I      intronic chr9:6436188(+) A-I      intronic chr9:6420121(+) A-I      intronic chr9:6419852(+) A-I      intronic chr9:6446751(+) A-I      intronic chr9:6422674(+) A-I      3'UTR chr9:6422735(+) A-I      3'UTR chr9:6488163(+) A-I      intronic chr9:6446771(+) A-I      intronic chr9:6491938(+) A-I      intronic chr9:6483071(+) A-I      intronic chr9:6463705(+) A-I      intronic chr9:6488893(+) A-I      intronic chr9:6422231(+) A-I      intronic chr9:6488026(+) A-I      intronic chr9:6463161(+) A-I      intronic chr9:6488236(+) A-I      intronic chr9:6487682(+) A-I      intronic chr9:6491916(+) A-I      intronic chr9:6487506(+) A-I      intronic chr9:6441159(+) A-I      intronic chr9:6429114(+) A-I      intronic chr9:6488055(+) A-I      intronic chr9:6427667(+) A-I      intronic chr9:6487289(+) A-I      intronic chr9:6484544(+) A-I      intronic chr9:6420195(+) A-I      intronic chr9:6420584(+) A-I      intronic chr9:6476694(+) A-I      intronic chr9:6488054(+) A-I      intronic chr9:6442094(+) A-I      intronic chr9:6422223(+) A-I      intronic chr9:6420257(+) A-I      intronic chr9:6459912(+) A-I      intronic chr9:6487288(+) A-I      intronic chr9:6487547(+) A-I      intronic chr9:6420186(+) A-I      intronic chr9:6477165(+) A-I      intronic chr9:6426853(+) A-I      intronic chr9:6482781(+) A-I      intronic chr9:6462849(+) A-I      intronic chr9:6483062(+) A-I      intronic chr9:6463646(+) A-I      intronic chr9:6488093(+) A-I      intronic chr9:6483124(+) A-I      intronic chr9:6431426(+) A-I      intronic chr9:6427529(+) A-I      intronic chr9:6484614(+) A-I      intronic chr9:6428611(+) A-I      intronic chr9:6488096(+) A-I      intronic chr9:6484670(+) A-I      intronic chr9:6482666(+) A-I      intronic chr9:6484669(+) A-I      intronic chr9:6463654(+) A-I      intronic chr9:6444882(+) A-I      intronic chr9:6491913(+) A-I      intronic chr9:6428908(+) A-I      intronic chr9:6490476(+) A-I      intronic chr9:6431408(+) A-I      intronic chr9:6428909(+) A-I      intronic chr9:6482762(+) A-I      intronic chr9:6463660(+) A-I      intronic chr9:6420126(+) A-I      intronic chr9:6426776(+) A-I      intronic chr9:6462664(+) A-I      intronic chr9:6487685(+) A-I      intronic chr9:6420566(+) A-I      intronic chr9:6483712(+) A-I      intronic chr9:6484281(+) A-I      intronic chr9:6466552(+) A-I      intronic chr9:6483202(+) A-I      intronic chr9:6488039(+) A-I      intronic chr9:6503124(+) A-I      intronic chr9:6485754(+) A-I      intronic chr9:6487601(+) A-I      intronic chr9:6487722(+) A-I      intronic chr9:6488062(+) A-I      intronic chr9:6477086(+) A-I      intronic chr9:6484290(+) A-I      intronic chr9:6463129(+) A-I      intronic chr9:6441188(+) A-I      intronic chr9:6477154(+) A-I      intronic chr9:6491942(+) A-I      intronic chr9:6487509(+) A-I      intronic chr9:6490517(+) A-I      intronic chr9:6428619(+) A-I      intronic chr9:6492007(+) A-I      intronic chr9:6462780(+) A-I      intronic chr9:6463610(+) A-I      intronic chr9:6429115(+) A-I      intronic chr9:6442185(+) A-I      intronic chr9:6487397(+) A-I      intronic chr9:6493043(+) A-I      intronic chr9:6482726(+) A-I      intronic chr9:6491923(+) A-I      intronic chr9:6463196(+) A-I      intronic chr9:6426932(+) A-I      intronic chr9:6463130(+) A-I      intronic chr9:6488080(+) A-I      intronic chr9:6482701(+) A-I      intronic chr9:6477083(+) A-I      intronic chr9:6446724(+) A-I      intronic chr9:6500220(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	UHRF2	chr9:6466552(+) A-G intron -    22484847 chr9:6484614(+) A-G intron -    22484847 chr9:6488054(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	UHRF2	chr9:6413206-6413207(+) m6A 5'UTR//exon       24981863 chr9:6413224-6413225(+) m6A 5'UTR//exon       24981863 chr9:6414143-6414144(+) m6A exon//intron       24284625 chr9:6420949-6420950(+) m6A CDS//exon       24284625//22608085 chr9:6420984-6420985(+) m6A CDS//exon       24284625//22575960//22608085 chr9:6421027-6421028(+) m6A CDS//exon       24284625//22575960//22608085 chr9:6421075-6421076(+) m6A 5'UTR//CDS//exon       24284625//22608085 chr9:6433999-6434000(+) m6A CDS//exon//intron       24284625//24981863//22608085 chr9:6434015-6434016(+) m6A CDS//exon//intron       24284625//24981863//22608085 chr9:6434048-6434049(+) m6A CDS//exon//intron       24284625//24981863//22608085 chr9:6434082-6434083(+) m6A CDS//exon//intron       24284625//24981863//27773535//22608085 chr9:6434097-6434098(+) m6A CDS//exon//intron       24284625//24981863//27773535//22608085 chr9:6434124-6434125(+) m6A CDS//exon//intron       24284625//24981863//27773535//22608085 chr9:6434195-6434196(+) m6A exon//intron       24981863//22608085 chr9:6434222-6434223(+) m6A exon//intron       22608085 chr9:6499774-6499775(+) m6A exon//intron       - chr9:6499881-6499882(+) m6A 3'UTR//CDS//exon       - chr9:6499906-6499907(+) m6A 3'UTR//CDS//exon       - chr9:6506134-6506135(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr9:6506219-6506220(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22608085 chr9:6506265-6506266(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-3p	Exosome K562 cells     24460325
	UHRF2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-3p
Interactor2: UHRF2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg