Basic Information:

  VIRBase ID:  

VHID00285924

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-3p:  MIMAT0000997          RMI1:  NM_001358294     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-3p	RMI1
miRBase Accession/Entrez ID	MIMAT0000997	80010
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BLAP75//C9orf76//FAAP75

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RMI1	chr9:86604718(+) A-I      intronic chr9:86604712(+) A-I      intronic chr9:86604526(+) A-I      intronic chr9:86604521(+) A-I      intronic chr9:86604285(+) A-I      intronic chr9:86604281(+) A-I      intronic chr9:86604511(+) A-I      intronic chr9:86602913(+) A-I      intronic chr9:86602158(+) A-I      intronic chr9:86600777(+) A-I      intronic chr9:86609197(+) A-I      intronic chr9:86609249(+) A-I      intronic chr9:86604307(+) A-I      intronic chr9:86613962(+) A-I      intronic chr9:86604305(+) A-I      intronic chr9:86613935(+) A-I      intronic chr9:86613925(+) A-I      intronic chr9:86613900(+) A-I      intronic chr9:86613794(+) A-I      intronic chr9:86609717(+) A-I      intronic chr9:86609634(+) A-I      intronic chr9:86606523(+) A-I      intronic chr9:86606467(+) A-I      intronic chr9:86606305(+) A-I      intronic chr9:86605350(+) A-I      intronic chr9:86605280(+) A-I      intronic chr9:86603408(+) A-I      intronic chr9:86603385(+) A-I      intronic chr9:86602053(+) A-I      intronic chr9:86602079(+) A-I      intronic chr9:86602934(+) A-I      intronic chr9:86604298(+) A-I      intronic chr9:86604286(+) A-I      intronic chr9:86604770(+) A-I      intronic chr9:86604783(+) A-I      intronic chr9:86604723(+) A-I      intronic chr9:86604266(+) A-I      intronic chr9:86603348(+) A-I      intronic chr9:86603964(+) A-I      intronic chr9:86606263(+) A-I      intronic chr9:86606308(+) A-I      intronic chr9:86605803(+) A-I      intronic chr9:86605314(+) A-I      intronic chr9:86605331(+) A-I      intronic chr9:86605779(+) A-I      intronic chr9:86606501(+) A-I      intronic chr9:86605196(+) A-I      intronic chr9:86606357(+) A-I      intronic chr9:86603511(+) A-I      intronic chr9:86605346(+) A-I      intronic chr9:86605176(+) A-I      intronic chr9:86603447(+) A-I      intronic chr9:86605852(+) A-I      intronic chr9:86603901(+) A-I      intronic chr9:86605160(+) A-I      intronic chr9:86618010(+) A-I      3'UTR chr9:86605310(+) A-I      intronic chr9:86602107(+) A-I      intronic chr9:86603368(+) A-I      intronic chr9:86603402(+) A-I      intronic chr9:86603384(+) A-I      intronic chr9:86609546(+) A-I      intronic chr9:86610412(+) A-I      intronic chr9:86603073(+) A-I      intronic chr9:86606419(+) A-I      intronic chr9:86613801(+) A-I      intronic chr9:86603876(+) A-I      intronic chr9:86609579(+) A-I      intronic chr9:86602120(+) A-I      intronic chr9:86606454(+) A-I      intronic chr9:86603890(+) A-I      intronic chr9:86605296(+) A-I      intronic chr9:86602236(+) A-I      intronic chr9:86603051(+) A-I      intronic chr9:86613905(+) A-I      intronic chr9:86602859(+) A-I      intronic chr9:86606433(+) A-I      intronic chr9:86609707(+) A-I      intronic chr9:86602010(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	RMI1	chr9:86604318(+) A-I intron -    22327324 chr9:86604975(+) A-I intron -    22327324 chr9:86604318(+) A-G intron -    22484847 chr9:86604426(+) A-G intron -    22484847 chr9:86604427(+) A-G intron -    22484847 chr9:86604471(+) A-G intron -    22484847 chr9:86604482(+) A-G intron -    22484847 chr9:86604975(+) A-G intron -    22484847 chr9:86609210(+) A-G intron -    22484847 chr9:86603901(+) A-G intron -    22484847 chr9:86606501(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RMI1	chr9:86595720-86595721(+) m6A 5'UTR       25456834//24981863 chr9:86595771-86595772(+) m6A 5'UTR       24981863 chr9:86595823-86595824(+) m6A 5'UTR//intron       24981863 chr9:86615934-86615935(+) m6A CDS       24284625//24981863//22608085 chr9:86616050-86616051(+) m6A CDS       24284625//24981863//22608085 chr9:86616275-86616276(+) m6A CDS       24284625//24981863//22608085 chr9:86616449-86616450(+) m6A CDS       24981863//22608085 chr9:86616539-86616540(+) m6A CDS       24284625//24981863//27773535//22608085 chr9:86616568-86616569(+) m6A CDS       24284625//24981863//27773535//22608085 chr9:86616583-86616584(+) m6A CDS       24284625//24981863//27773535//22608085 chr9:86616638-86616639(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr9:86616743-86616744(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr9:86616782-86616783(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr9:86616794-86616795(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr9:86616802-86616803(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:86616873-86616874(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:86616887-86616888(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:86616897-86616898(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:86617009-86617010(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:86617040-86617041(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr9:86617057-86617058(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr9:86617087-86617088(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr9:86617093-86617094(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr9:86617159-86617160(+) m6A CDS       24284625//24981863//27773535//22608085 chr9:86617167-86617168(+) m6A CDS       24284625//24981863//27773535//22608085 chr9:86617184-86617185(+) m6A CDS       24284625//24981863//27773535//22608085 chr9:86617403-86617404(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr9:86617531-86617532(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085 chr9:86617586-86617587(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr9:86617742-86617743(+) m6A CDS       24981863//22608085 chr9:86617783-86617784(+) m6A 3'UTR       24981863//22608085 chr9:86617801-86617802(+) m6A 3'UTR       22608085 chr9:86617811-86617812(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-3p	Exosome K562 cells     24460325
	RMI1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-3p
Interactor2: RMI1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg