Basic Information:

  VIRBase ID:  

VHID00285622

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-3p:  MIMAT0000997          STRIP2:  NM_001134336     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-3p	STRIP2
miRBase Accession/Entrez ID	MIMAT0000997	57464
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM40B//FAR11B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	STRIP2	chr7:129081430(+) A-I      intronic chr7:129121071(+) A-I      intronic chr7:129119448(+) A-I      intronic chr7:129081643(+) A-I      intronic chr7:129081799(+) A-I      intronic chr7:129081968(+) A-I      intronic chr7:129122441(+) A-I      intronic chr7:129081648(+) A-I      intronic chr7:129082951(+) A-I      intronic chr7:129118914(+) A-I      intronic chr7:129118926(+) A-I      intronic chr7:129119431(+) A-I      intronic chr7:129127972(+) A-I      3'UTR chr7:129127045(+) A-I      3'UTR chr7:129127042(+) A-I      3'UTR chr7:129127036(+) A-I      3'UTR chr7:129126994(+) A-I      3'UTR chr7:129127992(+) A-I      3'UTR chr7:129126877(+) A-I      3'UTR chr7:129081813(+) A-I      intronic chr7:129114115(+) A-I      intronic chr7:129119099(+) A-I      intronic chr7:129127061(+) A-I      3'UTR chr7:129126911(+) A-I      3'UTR chr7:129127987(+) A-I      3'UTR chr7:129081837(+) A-I      intronic chr7:129118272(+) A-I      intronic chr7:129123719(+) A-I      intronic chr7:129118286(+) A-I      intronic chr7:129118915(+) A-I      intronic chr7:129083133(+) A-I      intronic chr7:129081814(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	STRIP2	chr7:129074285-129074286(+) m6A 5'UTR       25456834//24981863 chr7:129074320-129074321(+) m6A CDS       25456834//24981863 chr7:129074337-129074338(+) m6A CDS       25456834//24981863 chr7:129079872-129079873(+) m6A CDS       24981863 chr7:129083885-129083886(+) m6A CDS       24209618 chr7:129098074-129098075(+) m6A CDS       24284625 chr7:129098083-129098084(+) m6A CDS//exon       24284625 chr7:129098112-129098113(+) m6A CDS//exon       24284625 chr7:129122823-129122824(+) m6A CDS       - chr7:129125432-129125433(+) m6A CDS       24284625//24981863//22608085 chr7:129125440-129125441(+) m6A CDS       24284625//24981863//22608085 chr7:129125507-129125508(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr7:129125515-129125516(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr7:129125718-129125719(+) m6A 3'UTR       24284625//24981863//22608085 chr7:129125899-129125900(+) m6A 3'UTR       - chr7:129125916-129125917(+) m6A 3'UTR       - chr7:129125954-129125955(+) m6A 3'UTR       - chr7:129126081-129126082(+) m6A 3'UTR       24981863 chr7:129126102-129126103(+) m6A 3'UTR       24981863 chr7:129127077-129127078(+) m6A 3'UTR       - chr7:129128115-129128116(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-3p	Exosome K562 cells     24460325
	STRIP2	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-3p
Interactor2: STRIP2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg