Basic Information:

  VIRBase ID:  

VHID00283538

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-3p:  MIMAT0000997          HNRNPK:  NM_002140     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-3p	HNRNPK
miRBase Accession/Entrez ID	MIMAT0000997	3190
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AUKS//CSBP//HNRPK//TUNP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HNRNPK	chr9:86583983-86583984(-) m6A 3'UTR       - chr9:86584060-86584061(-) m6A 3'UTR       - chr9:86584080-86584081(-) m6A 3'UTR       - chr9:86584111-86584112(-) m6A 3'UTR       - chr9:86584660-86584661(-) m6A 3'UTR//intron       27773535 chr9:86585079-86585080(-) m6A CDS//exon       24981863 chr9:86585112-86585113(-) m6A CDS//exon       24981863 chr9:86585119-86585120(-) m6A CDS//exon       24981863 chr9:86585204-86585205(-) m6A CDS//exon       24981863 chr9:86585272-86585273(-) m6A exon//intron       24981863 chr9:86586242-86586243(-) m6A CDS       22575960 chr9:86586249-86586250(-) m6A CDS       22575960 chr9:86586602-86586603(-) m6A CDS       22575960 chr9:86586610-86586611(-) m6A CDS       22575960 chr9:86586638-86586639(-) m6A CDS       22575960 chr9:86586885-86586886(-) m6A CDS       22575960 chr9:86587877-86587878(-) m6A 3'UTR//CDS       26404942 chr9:86588209-86588210(-) m6A 3'UTR//CDS//exon       26404942 chr9:86590537-86590538(-) m6A exon//intron       - chr9:86592646-86592647(-) m6A CDS//exon       24981863 chr9:86592669-86592670(-) m6A CDS//exon       24981863 chr9:86593124-86593125(-) m6A CDS//exon       24981863//22575960 chr9:86593142-86593143(-) m6A CDS//exon       24981863//22575960 chr9:86593155-86593156(-) m6A CDS//exon       22575960 chr9:86593160-86593161(-) m6A CDS//exon       22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-3p	Exosome K562 cells     24460325
	HNRNPK	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-3p
Interactor2: HNRNPK

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg