Detail Information

Basic Information:


  VIRBase ID:  

VHID00283032

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:           CDNF:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BHRF1-2-5p CDNF
miRBase
Accession/Entrez ID		 MIMAT0000996 441549
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - ARMETL1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CDNF
chr10:14873722(-) A-I      intronic
chr10:14873750(-) A-I      intronic
chr10:14873757(-) A-I      intronic
chr10:14870564(-) A-I      intronic
chr10:14871797(-) A-I      intronic
chr10:14867025(-) A-I      intronic
chr10:14874996(-) A-I      intronic
chr10:14872653(-) A-I      intronic
chr10:14876123(-) A-I      intronic
chr10:14871793(-) A-I      intronic
chr10:14878776(-) A-I      intronic
chr10:14878821(-) A-I      intronic
chr10:14872806(-) A-I      intronic
chr10:14862685(-) A-I      intronic
chr10:14871002(-) A-I      intronic
chr10:14876194(-) A-I      intronic
chr10:14876177(-) A-I      intronic
chr10:14864492(-) A-I      intronic
chr10:14864507(-) A-I      intronic
chr10:14864512(-) A-I      intronic
chr10:14865805(-) A-I      intronic
chr10:14870546(-) A-I      intronic
chr10:14865807(-) A-I      intronic
chr10:14865812(-) A-I      intronic
chr10:14866379(-) A-I      intronic
chr10:14866413(-) A-I      intronic
chr10:14870404(-) A-I      intronic
chr10:14876176(-) A-I      intronic
chr10:14876080(-) A-I      intronic
chr10:14876122(-) A-I      intronic
chr10:14873840(-) A-I      intronic
chr10:14873633(-) A-I      intronic
chr10:14874997(-) A-I      intronic
chr10:14864475(-) A-I      intronic
chr10:14876157(-) A-I      intronic
chr10:14869662(-) A-I      intronic
chr10:14874852(-) A-I      intronic
chr10:14867068(-) A-I      intronic
chr10:14874961(-) A-I      intronic
chr10:14871353(-) A-I      intronic
chr10:14874983(-) A-I      intronic
chr10:14870986(-) A-I      intronic
chr10:14872679(-) A-I      intronic
chr10:14871731(-) A-I      intronic
chr10:14875019(-) A-I      intronic
chr10:14875096(-) A-I      intronic
chr10:14872733(-) A-I      intronic
chr10:14875058(-) A-I      intronic
chr10:14873846(-) A-I      intronic
chr10:14870480(-) A-I      intronic
chr10:14872736(-) A-I      intronic
chr10:14872807(-) A-I      intronic
chr10:14872660(-) A-I      intronic
chr10:14875023(-) A-I      intronic
chr10:14873606(-) A-I      intronic
chr10:14876166(-) A-I      intronic
chr10:14871676(-) A-I      intronic
chr10:14870608(-) A-I      intronic
chr10:14869885(-) A-I      intronic
chr10:14875057(-) A-I      intronic
chr10:14872842(-) A-I      intronic
chr10:14871483(-) A-I      intronic
chr10:14878765(-) A-I      intronic
chr10:14875028(-) A-I      intronic
chr10:14872832(-) A-I      intronic
chr10:14875027(-) A-I      intronic
chr10:14873702(-) A-I      intronic
chr10:14870413(-) A-I      intronic
chr10:14878891(-) A-I      intronic
chr10:14871726(-) A-I      intronic
chr10:14876197(-) A-I      intronic
chr10:14871757(-) A-I      intronic
chr10:14871767(-) A-I      intronic
chr10:14873828(-) A-I      intronic
chr10:14874951(-) A-I      intronic
chr10:14870941(-) A-I      intronic
chr10:14870383(-) A-I      intronic
chr10:14870466(-) A-I      intronic
chr10:14878893(-) A-I      intronic
chr10:14865554(-) A-I      intronic
chr10:14871740(-) A-I      intronic
chr10:14873685(-) A-I      intronic
chr10:14876160(-) A-I      intronic
chr10:14873748(-) A-I      intronic
chr10:14873868(-) A-I      intronic
chr10:14865624(-) A-I      intronic
chr10:14871703(-) A-I      intronic
chr10:14871714(-) A-I      intronic
chr10:14873670(-) A-I      intronic
chr10:14870534(-) A-I      intronic
chr10:14878767(-) A-I      intronic
chr10:14870601(-) A-I      intronic
chr10:14873743(-) A-I      intronic
chr10:14871438(-) A-I      intronic
chr10:14873665(-) A-I      intronic
chr10:14875126(-) A-I      intronic
chr10:14873751(-) A-I      intronic
chr10:14871804(-) A-I      intronic
chr10:14865667(-) A-I      intronic
chr10:14876083(-) A-I      intronic
chr10:14873698(-) A-I      intronic
chr10:14871896(-) A-I      intronic
chr10:14865704(-) A-I      intronic
chr10:14870602(-) A-I      intronic
chr10:14873615(-) A-I      intronic
chr10:14871766(-) A-I      intronic
chr10:14873823(-) A-I      intronic
chr10:14862546(-) A-I      intronic
chr10:14866383(-) A-I      intronic
chr10:14871901(-) A-I      intronic
chr10:14865703(-) A-I      intronic
chr10:14870397(-) A-I      intronic
chr10:14870498(-) A-I      intronic
chr10:14873662(-) A-I      intronic
chr10:14870483(-) A-I      intronic
chr10:14872809(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CDNF
chr10:14871353(-) A-G intron -    22484847
chr10:14876326(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CDNF
chr10:14861814-14861815(-) m6A 3'UTR//exon       27773535
chr10:14861915-14861916(-) m6A 3'UTR//exon       24981863//27773535//22608085
chr10:14861989-14861990(-) m6A CDS//exon       24981863//27773535//22608085
chr10:14862049-14862050(-) m6A CDS//exon       24981863//27773535//22608085
chr10:14862144-14862145(-) m6A CDS//exon       27773535
chr10:14862151-14862152(-) m6A CDS//exon       27773535
chr10:14870204-14870205(-) m6A 5'UTR//CDS//exon       27773535
chr10:14870228-14870229(-) m6A 5'UTR//CDS//exon       27773535
chr10:14870252-14870253(-) m6A 5'UTR//CDS//exon       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BHRF1-2-5p
Exosome B cell line (Raji)     21505438
CDNF
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: CDNF

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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