Basic Information:

  VIRBase ID:  

VHID00283019

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:  MIMAT0000996          NOMO3:  NM_001004067     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-5p	NOMO3
miRBase Accession/Entrez ID	MIMAT0000996	408050
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Nomo

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NOMO3	chr16:16361366(+) A-I      intronic chr16:16331590(+) A-I      intronic chr16:16361396(+) A-I      intronic chr16:16350156(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NOMO3	chr16:16388045-16388046(+) Y 3'UTR//CDS//exon       25219674 chr16:16388122-16388123(+) m6A 3'UTR//CDS//exon       24981863 chr16:16388134-16388135(+) m6A 3'UTR//CDS//exon       24981863 chr16:16388141-16388142(+) m6A 3'UTR//CDS//exon       24981863 chr16:16388167-16388168(+) m6A 3'UTR//exon//intron       24981863 chr16:16388188-16388189(+) m6A 3'UTR//exon//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-5p	Exosome B cell line (Raji)     21505438
	NOMO3	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|HeLa-S3 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: NOMO3

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg