Detail Information

Basic Information:


  VIRBase ID:  

VHID00282969

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:           SLC22A10:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BHRF1-2-5p SLC22A10
miRBase
Accession/Entrez ID
MIMAT0000996 387775
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - hOAT5//OAT5

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SLC22A10
chr11:62912938(+) A-I      intronic
chr11:62912931(+) A-I      intronic
chr11:62912984(+) A-I      intronic
chr11:62912985(+) A-I      intronic
chr11:62912962(+) A-I      intronic
chr11:62912957(+) A-I      intronic
chr11:62912942(+) A-I      intronic
chr11:63077340(+) A-I      intronic
chr11:62912878(+) A-I      intronic
chr11:63067622(+) A-I      intronic
chr11:62912919(+) A-I      intronic
chr11:63067636(+) A-I      intronic
chr11:62912918(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SLC22A10
chr11:63065138-63065139(+) m6A CDS//exon//intron       27773535
chr11:63065146-63065147(+) m6A CDS//exon//intron       27773535
chr11:63066433-63066434(+) m6A CDS//exon       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BHRF1-2-5p
Exosome B cell line (Raji)     21505438
SLC22A10
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: SLC22A10

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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