Basic Information:

  VIRBase ID:  

VHID00282924

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:  MIMAT0000996          DCDC1:  NM_020869     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-5p	DCDC1
miRBase Accession/Entrez ID	MIMAT0000996	341019
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DCDC5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DCDC1	chr11:30893569(-) A-I      intronic chr11:30893559(-) A-I      intronic chr11:30893558(-) A-I      intronic chr11:30893528(-) A-I      intronic chr11:31388622(-) A-I      intronic chr11:30914018(-) A-I      intronic chr11:30887856(-) A-I      intronic chr11:30887906(-) A-I      intronic chr11:31377319(-) A-I      intronic chr11:31377317(-) A-I      intronic chr11:31365031(-) A-I      intronic chr11:31377309(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DCDC1	chr11:30885168-30885169(-) m6A 3'UTR//intron       27773535 chr11:30885175-30885176(-) m6A 3'UTR//intron       27773535 chr11:30885264-30885265(-) m6A 3'UTR//intron       27773535 chr11:30886374-30886375(-) m6A 3'UTR//intron       27773535 chr11:30886434-30886435(-) m6A 3'UTR//intron       27773535 chr11:30886449-30886450(-) m6A 3'UTR//intron       27773535 chr11:30886565-30886566(-) m6A 3'UTR//exon//intron       24981863//27773535 chr11:30886646-30886647(-) m6A 3'UTR//exon//intron       24981863//27773535 chr11:30886684-30886685(-) m6A 3'UTR//exon//intron       24981863//27773535 chr11:30886706-30886707(-) m6A 3'UTR//exon//intron       24981863//27773535 chr11:30886805-30886806(-) m6A 3'UTR//exon//intron       27773535 chr11:30886842-30886843(-) m6A 3'UTR//exon//intron       27773535 chr11:30886849-30886850(-) m6A 3'UTR//exon//intron       27773535 chr11:30886870-30886871(-) m6A 3'UTR//exon//intron       27773535 chr11:30900118-30900119(-) m6A 3'UTR//exon       27773535 chr11:30900185-30900186(-) m6A 3'UTR//CDS//exon       27773535 chr11:30900250-30900251(-) m6A 3'UTR//CDS//exon       27773535 chr11:30902713-30902714(-) m6A 3'UTR//CDS//exon       27773535 chr11:30902726-30902727(-) m6A 3'UTR//CDS//exon       27773535 chr11:30902844-30902845(-) m6A 3'UTR//CDS//exon       27773535 chr11:30903630-30903631(-) m6A 3'UTR//intron       27773535 chr11:30903654-30903655(-) m6A 3'UTR//intron       27773535 chr11:30903691-30903692(-) m6A 3'UTR//intron       27773535 chr11:30915803-30915804(-) m6A CDS//exon       27773535 chr11:30915812-30915813(-) m6A CDS//exon       27773535 chr11:30915821-30915822(-) m6A CDS//exon       27773535 chr11:30964880-30964881(-) m6A 3'UTR//intron       27773535 chr11:30964977-30964978(-) m6A 3'UTR//intron       27773535 chr11:30964982-30964983(-) m6A 3'UTR//intron       27773535 chr11:30965731-30965732(-) m6A 3'UTR//intron       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-5p	Exosome B cell line (Raji)     21505438
	DCDC1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: DCDC1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg