Detail Information

Basic Information:


  VIRBase ID:  

VHID00282903

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:           EIF4E3:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BHRF1-2-5p EIF4E3
miRBase
Accession/Entrez ID		 MIMAT0000996 317649
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - eIF-4E3//eIF4E-3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR EIF4E3
chr3:71755960(-) A-I      intronic
chr3:71746259(-) A-I      intronic
chr3:71746315(-) A-I      intronic
chr3:71746350(-) A-I      intronic
chr3:71746385(-) A-I      intronic
chr3:71746390(-) A-I      intronic
chr3:71749299(-) A-I      intronic
chr3:71769017(-) A-I      intronic
chr3:71769016(-) A-I      intronic
chr3:71762765(-) A-I      intronic
chr3:71763145(-) A-I      intronic
chr3:71762770(-) A-I      intronic
chr3:71762767(-) A-I      intronic
chr3:71762766(-) A-I      intronic
chr3:71769025(-) A-I      intronic
chr3:71748278(-) A-I      intronic
chr3:71748318(-) A-I      intronic
chr3:71748334(-) A-I      intronic
chr3:71769475(-) A-I      intronic
chr3:71769479(-) A-I      intronic
chr3:71769503(-) A-I      intronic
chr3:71769514(-) A-I      intronic
chr3:71755971(-) A-I      intronic
chr3:71746391(-) A-I      intronic
chr3:71769391(-) A-I      intronic
chr3:71757225(-) A-I      intronic
chr3:71746064(-) A-I      intronic
chr3:71746136(-) A-I      intronic
chr3:71755970(-) A-I      intronic
chr3:71757219(-) A-I      intronic
chr3:71755968(-) A-I      intronic
chr3:71746232(-) A-I      intronic
chr3:71746243(-) A-I      intronic
chr3:71769605(-) A-I      intronic
chr3:71748296(-) A-I      intronic
chr3:71769373(-) A-I      intronic
chr3:71748352(-) A-I      intronic
chr3:71748302(-) A-I      intronic
chr3:71746304(-) A-I      intronic
chr3:71769065(-) A-I      intronic
chr3:71768993(-) A-I      intronic
chr3:71755776(-) A-I      intronic
chr3:71762696(-) A-I      intronic
chr3:71755034(-) A-I      intronic
chr3:71769485(-) A-I      intronic
chr3:71749581(-) A-I      intronic
chr3:71755029(-) A-I      intronic
chr3:71757298(-) A-I      intronic
chr3:71746305(-) A-I      intronic
chr3:71755005(-) A-I      intronic
chr3:71748167(-) A-I      intronic
chr3:71769082(-) A-I      intronic
chr3:71762650(-) A-I      intronic
chr3:71768960(-) A-I      intronic
chr3:71746371(-) A-I      intronic
chr3:71762666(-) A-I      intronic
chr3:71800186(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED EIF4E3
chr3:71755005(-) A-G intron -    22484847
chr3:71755034(-) A-G intron -    22484847
chr3:71769605(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase EIF4E3
chr3:71733602-71733603(-) m6A 3'UTR       24981863
chr3:71733615-71733616(-) m6A 3'UTR       24981863
chr3:71733688-71733689(-) m6A 3'UTR       24981863//27371828
chr3:71733752-71733753(-) m6A 3'UTR//exon       24981863//27371828
chr3:71743039-71743040(-) m6A CDS//exon//intron       24981863
chr3:71743050-71743051(-) m6A CDS//exon//intron       24209618//24981863
chr3:71745617-71745618(-) m6A CDS//intron       24209618//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BHRF1-2-5p
Exosome B cell line (Raji)     21505438
EIF4E3
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: EIF4E3

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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