Detail Information

Basic Information:


  VIRBase ID:  

VHID00282605

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:           DPY19L3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BHRF1-2-5p DPY19L3
miRBase
Accession/Entrez ID		 MIMAT0000996 147991
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DPY19L3
chr19:32918162(+) A-I      intronic
chr19:32918163(+) A-I      intronic
chr19:32918175(+) A-I      intronic
chr19:32918178(+) A-I      intronic
chr19:32924581(+) A-I      intronic
chr19:32910465(+) A-I      intronic
chr19:32910406(+) A-I      intronic
chr19:32910430(+) A-I      intronic
chr19:32910435(+) A-I      intronic
chr19:32910446(+) A-I      intronic
chr19:32910466(+) A-I      intronic
chr19:32916237(+) A-I      intronic
chr19:32918139(+) A-I      intronic
chr19:32918148(+) A-I      intronic
chr19:32973390(+) A-I      3'UTR
chr19:32898930(+) A-I      intronic
chr19:32901582(+) A-I      intronic
chr19:32904850(+) A-I      intronic
chr19:32904868(+) A-I      intronic
chr19:32908281(+) A-I      intronic
chr19:32908360(+) A-I      intronic
chr19:32908419(+) A-I      intronic
chr19:32908424(+) A-I      intronic
chr19:32911016(+) A-I      intronic
chr19:32912360(+) A-I      intronic
chr19:32912462(+) A-I      intronic
chr19:32914904(+) A-I      intronic
chr19:32916255(+) A-I      intronic
chr19:32916256(+) A-I      intronic
chr19:32916275(+) A-I      intronic
chr19:32916279(+) A-I      intronic
chr19:32916298(+) A-I      intronic
chr19:32916304(+) A-I      intronic
chr19:32916321(+) A-I      intronic
chr19:32916336(+) A-I      intronic
chr19:32918947(+) A-I      intronic
chr19:32918964(+) A-I      intronic
chr19:32918977(+) A-I      intronic
chr19:32918981(+) A-I      intronic
chr19:32919087(+) A-I      intronic
chr19:32921649(+) A-I      intronic
chr19:32921723(+) A-I      intronic
chr19:32925444(+) A-I      intronic
chr19:32946100(+) A-I      intronic
chr19:32898861(+) A-I      intronic
chr19:32960365(+) A-I      intronic
chr19:32910398(+) A-I      intronic
chr19:32914649(+) A-I      intronic
chr19:32960354(+) A-I      intronic
chr19:32922176(+) A-I      intronic
chr19:32947443(+) A-I      intronic
chr19:32910578(+) A-I      intronic
chr19:32914825(+) A-I      intronic
chr19:32904744(+) A-I      intronic
chr19:32947811(+) A-I      intronic
chr19:32914798(+) A-I      intronic
chr19:32919140(+) A-I      intronic
chr19:32951056(+) A-I      intronic
chr19:32898874(+) A-I      intronic
chr19:32921648(+) A-I      intronic
chr19:32960317(+) A-I      intronic
chr19:32960334(+) A-I      intronic
chr19:32965597(+) A-I      intronic
chr19:32918121(+) A-I      intronic
chr19:32951170(+) A-I      intronic
chr19:32916377(+) A-I      intronic
chr19:32897447(+) A-I      intronic
chr19:32911409(+) A-I      intronic
chr19:32921228(+) A-I      intronic
chr19:32910861(+) A-I      intronic
chr19:32914400(+) A-I      intronic
chr19:32915092(+) A-I      intronic
chr19:32904683(+) A-I      intronic
chr19:32908305(+) A-I      intronic
chr19:32947201(+) A-I      intronic
chr19:32924417(+) A-I      intronic
chr19:32932529(+) A-I      intronic
chr19:32914851(+) A-I      intronic
chr19:32905206(+) A-I      intronic
chr19:32905119(+) A-I      intronic
chr19:32918978(+) A-I      intronic
chr19:32912454(+) A-I      intronic
chr19:32917955(+) A-I      intronic
chr19:32919125(+) A-I      intronic
chr19:32951242(+) A-I      intronic
chr19:32919139(+) A-I      intronic
chr19:32904688(+) A-I      intronic
chr19:32912426(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DPY19L3
chr19:32902695(+) A-I intron -    15342557
chr19:32902822(+) A-I intron -    15342557
chr19:32902831(+) A-I intron -    15342557
chr19:32902857(+) A-I intron -    15342557
chr19:32903815(+) A-I intron -    15342557
chr19:32903705(+) A-G intron -    22484847
chr19:32914798(+) A-G intron -    22484847
chr19:32915115(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DPY19L3
chr19:32968503-32968504(+) m6A 3'UTR//CDS//exon       -
chr19:32968531-32968532(+) m6A 3'UTR//CDS//exon       -
chr19:32968551-32968552(+) m6A 3'UTR//CDS//exon       -
chr19:32971389-32971390(+) m6A 3'UTR//CDS//exon       -
chr19:32971437-32971438(+) m6A 3'UTR//CDS//exon       -
chr19:32971446-32971447(+) m6A 3'UTR//CDS//exon       -
chr19:32973022-32973023(+) m6A 3'UTR//CDS//exon       -
chr19:32973030-32973031(+) m6A 3'UTR//CDS//exon       24284625
chr19:32973063-32973064(+) m6A 3'UTR//CDS//exon       24284625//22608085
chr19:32973105-32973106(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085
chr19:32973110-32973111(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085
chr19:32973138-32973139(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085
chr19:32973185-32973186(+) m6A 3'UTR//exon       24284625//24981863//26404942//22608085
chr19:32973201-32973202(+) m6A 3'UTR//exon       24284625//24981863//26404942//22608085
chr19:32973241-32973242(+) m6A 3'UTR//exon       24284625//24981863//22608085
chr19:32973520-32973521(+) m6A 3'UTR//exon       24981863//26404942//27773535//22608085
chr19:32973584-32973585(+) m6A 3'UTR//exon       24981863//26404942//22608085
chr19:32975344-32975345(+) m6A 3'UTR//exon       25456834//24981863//22608085
chr19:32975373-32975374(+) m6A 3'UTR//exon       25456834//24981863//22608085
chr19:32975424-32975425(+) m6A 3'UTR//exon       24284625//24981863//22608085
chr19:32975461-32975462(+) m6A 3'UTR//exon       24284625//24981863//22608085
chr19:32975494-32975495(+) m6A 3'UTR//exon       24284625//24981863//22608085
chr19:32975628-32975629(+) m6A 3'UTR//exon       24284625
chr19:32976633-32976634(+) Y 3'UTR//exon       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BHRF1-2-5p
Exosome B cell line (Raji)     21505438
DPY19L3
Cytosol K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: DPY19L3

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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