Basic Information:

  VIRBase ID:  

VHID00281949

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:  MIMAT0000996          LRRC4:  NM_022143     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-5p	LRRC4
miRBase Accession/Entrez ID	MIMAT0000996	64101
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NAG14//NGL-2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LRRC4	chr7:127668566-127668567(-) m6A 3'UTR       24981863 chr7:127668579-127668580(-) m6A 3'UTR       24981863 chr7:127668602-127668603(-) m6A 3'UTR       24981863 chr7:127668653-127668654(-) m6A 3'UTR       24981863//22608085 chr7:127668682-127668683(-) m6A 3'UTR       24981863//22608085 chr7:127668713-127668714(-) m6A 3'UTR       24981863//22608085 chr7:127668742-127668743(-) m6A CDS       24981863//22575960//22608085 chr7:127668756-127668757(-) m6A CDS       24981863//22575960//22608085 chr7:127668769-127668770(-) m6A CDS       24981863//22575960//22608085 chr7:127668785-127668786(-) m6A CDS       24981863//22575960//22608085 chr7:127668819-127668820(-) m6A CDS       24981863//22575960 chr7:127668831-127668832(-) m6A CDS       24981863//22575960 chr7:127668838-127668839(-) m6A CDS       24981863//22575960 chr7:127668860-127668861(-) m6A CDS       24981863//22575960 chr7:127668972-127668973(-) m6A CDS       25456834//24981863//22575960 chr7:127669000-127669001(-) m6A CDS       25456834//24981863//22575960 chr7:127669046-127669047(-) m6A CDS       25456834//24981863//22575960 chr7:127669120-127669121(-) m6A CDS       24981863 chr7:127669144-127669145(-) m6A CDS       24981863 chr7:127669440-127669441(-) m6A CDS       25456834//24981863 chr7:127669464-127669465(-) m6A CDS       25456834//24981863 chr7:127669525-127669526(-) m6A CDS       25456834//24981863 chr7:127669567-127669568(-) m6A CDS       25456834//24981863 chr7:127669580-127669581(-) m6A CDS       25456834//24981863 chr7:127669611-127669612(-) m6A CDS       25456834//24981863 chr7:127669662-127669663(-) m6A CDS       25456834//24981863 chr7:127669785-127669786(-) m6A CDS       24981863 chr7:127669883-127669884(-) m6A CDS       24981863 chr7:127669941-127669942(-) m6A CDS       25456834//24981863 chr7:127670064-127670065(-) m6A CDS       25456834 chr7:127670088-127670089(-) m6A CDS       25456834 chr7:127670163-127670164(-) m6A CDS       25456834 chr7:127671614-127671615(-) m6A 5'UTR//intron       25456834//24981863 chr7:127671622-127671623(-) m6A 5'UTR//intron       25456834//24981863 chr7:127672137-127672138(-) m6A 5'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-5p	Exosome B cell line (Raji)     21505438
	LRRC4	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: LRRC4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg