Basic Information:

  VIRBase ID:  

VHID00281934

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:  MIMAT0000996          MRPL17:  NM_022061     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-5p	MRPL17
miRBase Accession/Entrez ID	MIMAT0000996	63875
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	L17mt//LIP2//MRP-L17//MRP-L26//RPL17L//RPML26

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MRPL17	chr11:6702406-6702407(-) m6A 3'UTR//exon       24981863 chr11:6703224-6703225(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr11:6703245-6703246(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr11:6703269-6703270(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr11:6703362-6703363(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr11:6703412-6703413(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr11:6703439-6703440(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr11:6703460-6703461(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr11:6703575-6703576(-) m6A CDS//exon       24209618//26404942//27773535//27773536//22575960 chr11:6704020-6704021(-) m6A CDS//exon//intron       27773535//27371828//27773536 chr11:6704190-6704191(-) m6A exon//intron       25456834//27371828//22608085 chr11:6704219-6704220(-) m6A exon//intron       25456834//27371828//22608085 chr11:6704231-6704232(-) m6A exon//intron       25456834//27371828//22608085 chr11:6704259-6704260(-) m6A exon//intron       25456834//27371828//27773536//22608085 chr11:6704272-6704273(-) m6A exon//intron       25456834//27371828//27773536//22608085 chr11:6704278-6704279(-) m6A exon//intron       25456834//27371828//27773536//22608085 chr11:6704435-6704436(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536//22575960 chr11:6704528-6704529(-) m6A 5'UTR       24284625//24981863//26404942//27371828//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-5p	Exosome B cell line (Raji)     21505438
	MRPL17	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: MRPL17

Evidence Support:

Prediction-Evidence	PITA//Targetscan
Support Database	VmiReg