Basic Information:

  VIRBase ID:  

VHID00280725

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-2-5p:  MIMAT0000996          ABCG1:  NM_016818     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BHRF1-2-5p	ABCG1
miRBase Accession/Entrez ID	MIMAT0000996	9619
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ABC8//WHITE1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ABCG1	chr21:43661505(+) A-I      intronic chr21:43661647(+) A-I      intronic chr21:43681113(+) A-I      intronic chr21:43681122(+) A-I      intronic chr21:43681138(+) A-I      intronic chr21:43661594(+) A-I      intronic chr21:43691990(+) A-I      intronic chr21:43660715(+) A-I      intronic chr21:43622791(+) A-I      intronic chr21:43660619(+) A-I      intronic chr21:43660738(+) A-I      intronic chr21:43661828(+) A-I      intronic chr21:43668896(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ABCG1	chr21:43704771-43704772(+) m6A CDS//exon       - chr21:43706009-43706010(+) m6A CDS//exon       - chr21:43706193-43706194(+) m6A exon//intron       - chr21:43708034-43708035(+) m6A CDS//exon       - chr21:43708079-43708080(+) m6A CDS//exon       - chr21:43708091-43708092(+) m6A CDS//exon       - chr21:43708115-43708116(+) m6A CDS//exon       - chr21:43708156-43708157(+) m6A CDS//exon//intron       - chr21:43714962-43714963(+) m6A exon//intron       - chr21:43714979-43714980(+) m6A exon//intron       - chr21:43715012-43715013(+) m6A exon//intron       - chr21:43716416-43716417(+) m6A CDS//exon       24981863//22608085 chr21:43716503-43716504(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr21:43716521-43716522(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr21:43716534-43716535(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr21:43716599-43716600(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr21:43716622-43716623(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr21:43717162-43717163(+) m6A 3'UTR//exon       24981863 chr21:43717213-43717214(+) m6A 3'UTR//exon       24981863//22608085 chr21:43717238-43717239(+) m6A 3'UTR//exon       24981863//22608085 chr21:43717273-43717274(+) m6A 3'UTR//exon       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BHRF1-2-5p	Exosome B cell line (Raji)     21505438
	ABCG1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BHRF1-2-5p
Interactor2: ABCG1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg