Detail Information

Basic Information:


  VIRBase ID:  

VHID00277974

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BHRF1-1:           LILRB3:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BHRF1-1 LILRB3
miRBase
Accession/Entrez ID
MIMAT0000995 11025
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - CD85A//HL9//ILT-5//ILT5//LILRA6//LIR-3//LIR3//PIR-B//PIRB

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LILRB3
chr19:54720719-54720720(-) m6A 3'UTR       27371828
chr19:54720726-54720727(-) m6A 3'UTR       27371828
chr19:54720760-54720761(-) m6A 3'UTR       27371828
chr19:54720815-54720816(-) m6A 3'UTR       27371828
chr19:54720824-54720825(-) m6A 3'UTR       27371828
chr19:54720844-54720845(-) m6A 3'UTR       27371828
chr19:54720857-54720858(-) m6A 3'UTR       27371828
chr19:54720873-54720874(-) m6A 3'UTR       27371828
chr19:54720883-54720884(-) m6A 3'UTR       27371828
chr19:54720915-54720916(-) m6A 3'UTR       27371828
chr19:54720922-54720923(-) m6A 3'UTR       27371828
chr19:54720944-54720945(-) m6A 3'UTR       27371828
chr19:54721006-54721007(-) m6A 3'UTR//CDS//exon       27371828
chr19:54721194-54721195(-) m6A 3'UTR//CDS//exon       27371828
chr19:54721206-54721207(-) m6A 3'UTR//CDS//exon       27371828
chr19:54721224-54721225(-) m6A 3'UTR//CDS//exon       27371828
chr19:54721233-54721234(-) m6A 3'UTR//CDS//exon       27371828
chr19:54721295-54721296(-) m6A 3'UTR//CDS//exon       27371828
chr19:54721326-54721327(-) m6A 3'UTR//CDS//exon       27371828
chr19:54721372-54721373(-) m6A exon//intron       27371828
chr19:54721380-54721381(-) m6A exon//intron       27371828
chr19:54721415-54721416(-) m6A exon//intron       27371828
chr19:54722236-54722237(-) m6A 3'UTR//CDS//exon       27371828
chr19:54722251-54722252(-) m6A 3'UTR//CDS//exon       27371828
chr19:54722266-54722267(-) m6A 3'UTR//CDS//exon       27371828
chr19:54722473-54722474(-) m6A exon//intron       27371828
chr19:54722494-54722495(-) m6A exon//intron       27371828
chr19:54722518-54722519(-) m6A 3'UTR//CDS//exon       27371828
chr19:54722649-54722650(-) m6A 3'UTR//CDS//exon       27371828
chr19:54722662-54722663(-) m6A 3'UTR//CDS//exon       27371828
chr19:54722695-54722696(-) m6A 3'UTR//CDS//exon       -
chr19:54722706-54722707(-) m6A 3'UTR//CDS//exon       -
chr19:54722727-54722728(-) m6A exon//intron       -
chr19:54723003-54723004(-) m6A 3'UTR//CDS//exon       -
chr19:54723010-54723011(-) m6A 3'UTR//CDS//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BHRF1-1
Exosome Jurkat-derived T cell line (J77cl20)     21505438
LILRB3
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BHRF1-1
Interactor2: LILRB3

Evidence Support:


Prediction-Evidence cRep//RNAHybrid
Support Database RepTar//VmiReg

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