Basic Information:
VIRBase ID:
VHID00276935
Virus:
Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)
Host:
Homo sapiens
Confidence Score:
0.9489
Interaction Type:
Virus-Host interaction
Interactor Information:
|
Interactor1 |
Interactor2 |
Symbol |
EBER2 |
CLIC4 |
miRBase Accession/Entrez ID |
EBER2 |
25932 |
Organism |
Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) |
Homo sapiens |
Category |
lncRNA |
mRNA |
Alias |
-
|
CLIC4L//H1//huH1//MTCLIC//p64H1
|
RNA Editing:
Resource |
Symbol |
Editing Position |
Change |
Genetic Region |
RADAR |
CLIC4 |
|
Resource |
Symbol |
Editing Position |
Change |
SeqReg |
exReg |
PMID |
DARNED |
CLIC4 |
|
RNA Modification:
Resource |
Symbol |
ModificationPosition |
Type |
Genomic Context |
PMID |
RMBase |
CLIC4 |
|
RNA Localization:
Resource |
Symbol |
Subcellular Localization |
Tissue or Cell Line |
PMID |
RNALocate |
EBER2 |
|
CLIC4 |
|
Interaction Network (The top 100 interactions):
Interactor1: EBER2 |
|
Interactor2: CLIC4 |
|
Evidence Support:
Strong-Evidence |
ChIP//qRT-PCR |
Weak-Evidence |
RNA-Seq |
Prediction-Evidence |
RNAHybrid |
Support Database |
ViRBase
|
References:
PMID |
30176159 |
Target region |
None |
Source |
ViRBase
|
Interactor1 expression |
None |
Tissue or cell line |
BJAB-B1 lymphoma cells |
Interactor2 expression |
None |
Description |
Taken together, we propose that EBER2 interacts with the nascent transcripts of MRP, H1, and 7SL RNAs. |